From 2e0fc391736d3cc4c382d3fe4eaa5be692ceb717 Mon Sep 17 00:00:00 2001 From: Audrey Thoma Date: Thu, 7 Sep 2017 12:34:34 -0500 Subject: mlhka: new package (#5231) * mlhka: new package --- var/spack/repos/builtin/packages/mlhka/package.py | 42 +++++++++++++++++++++++ 1 file changed, 42 insertions(+) create mode 100644 var/spack/repos/builtin/packages/mlhka/package.py diff --git a/var/spack/repos/builtin/packages/mlhka/package.py b/var/spack/repos/builtin/packages/mlhka/package.py new file mode 100644 index 0000000000..f9b8a46a74 --- /dev/null +++ b/var/spack/repos/builtin/packages/mlhka/package.py @@ -0,0 +1,42 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Mlhka(Package): + """A maximum likelihood ratio test of natural selection, using polymorphism + and divergence data.""" + + homepage = "https://wright.eeb.utoronto.ca" + url = "https://github.com/rossibarra/MLHKA" + + version('2.1', git='https://github.com/rossibarra/MLHKA.git', + commit='e735ddd39073af58da21b00b27dea203736e5467') + + def install(self, spec, prefix): + cxx = which('c++') + cxx('MLHKA_version{0}.cpp'.format(self.version), '-o', 'MLHKA') + mkdirp(prefix.bin) + install('MLHKA', prefix.bin) -- cgit v1.2.3-70-g09d2