From 3a55d454972e9b6e70e68223159b050ea8065a98 Mon Sep 17 00:00:00 2001 From: Audrey Thoma Date: Wed, 16 Aug 2017 19:35:04 -0500 Subject: discovar: new package (#5129) --- .../repos/builtin/packages/discovar/package.py | 36 ++++++++++++++++++++++ 1 file changed, 36 insertions(+) create mode 100644 var/spack/repos/builtin/packages/discovar/package.py diff --git a/var/spack/repos/builtin/packages/discovar/package.py b/var/spack/repos/builtin/packages/discovar/package.py new file mode 100644 index 0000000000..fcce9263cc --- /dev/null +++ b/var/spack/repos/builtin/packages/discovar/package.py @@ -0,0 +1,36 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Discovar(AutotoolsPackage): + """DISCOVAR is a variant caller and small genome assembler.""" + + homepage = "https://software.broadinstitute.org/software/discovar/blog/" + url = "ftp://ftp.broadinstitute.org/pub/crd/Discovar/latest_source_code/discovar-52488.tar.gz" + + version('52488', 'e72a0b9363e25c99d8e8729c0be98364') + + conflicts('%gcc@6:') -- cgit v1.2.3-70-g09d2