From 637f72a8fed04ce92a7fe983496a39eed3e6c17a Mon Sep 17 00:00:00 2001 From: Audrey Thoma Date: Thu, 10 Aug 2017 20:04:10 -0500 Subject: fimpute: new package (#5060) --- .../repos/builtin/packages/fimpute/package.py | 40 ++++++++++++++++++++++ 1 file changed, 40 insertions(+) create mode 100644 var/spack/repos/builtin/packages/fimpute/package.py diff --git a/var/spack/repos/builtin/packages/fimpute/package.py b/var/spack/repos/builtin/packages/fimpute/package.py new file mode 100644 index 0000000000..bc18419923 --- /dev/null +++ b/var/spack/repos/builtin/packages/fimpute/package.py @@ -0,0 +1,40 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Fimpute(Package): + """FImpute uses an overlapping sliding window approach to efficiently + exploit relationships or haplotype similarities between target and + reference individuals.""" + + homepage = "http://www.aps.uoguelph.ca/~msargol/fimpute/" + url = "http://www.aps.uoguelph.ca/~msargol/fimpute/FImpute_Linux.zip" + + version('2014-01', 'df934a25c76dabef7d7afcb5b8058d98') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('FImpute', prefix.bin) -- cgit v1.2.3-60-g2f50