From 6a9d0b53a6f982dddcf36b41af706fc1c8fa03ca Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Sat, 16 Jan 2021 08:17:26 -0600 Subject: add version 0.4 to r-europepmc (#20947) --- .../repos/builtin/packages/r-europepmc/package.py | 23 ++++++++++++++++++---- 1 file changed, 19 insertions(+), 4 deletions(-) diff --git a/var/spack/repos/builtin/packages/r-europepmc/package.py b/var/spack/repos/builtin/packages/r-europepmc/package.py index ab50af5e6c..dae036aac9 100644 --- a/var/spack/repos/builtin/packages/r-europepmc/package.py +++ b/var/spack/repos/builtin/packages/r-europepmc/package.py @@ -7,21 +7,36 @@ from spack import * class REuropepmc(RPackage): - """europepmc: R Interface to the Europe PubMed Central RESTful Web - Service""" + """R Interface to the Europe PubMed Central RESTful Web Service + + An R Client for the Europe PubMed Central RESTful Web Service (see + for more information). It gives + access to both metadata on life science literature and open access full + texts. Europe PMC indexes all PubMed content and other literature sources + including Agricola, a bibliographic database of citations to the + agricultural literature, or Biological Patents. In addition to + bibliographic metadata, the client allows users to fetch citations and + reference lists. Links between life-science literature and other EBI + databases, including ENA, PDB or ChEMBL are also accessible. No + registration or API key is required. See the vignettes for usage + examples.""" homepage = "http://github.com/ropensci/europepmc/" url = "https://cloud.r-project.org/src/contrib/europepmc_0.3.tar.gz" list_url = "https://cloud.r-project.org/src/contrib/Archive/europepmc" + version('0.4', sha256='d55f62963d0ee84830654bbc78f4ad8285e376b04be137cbeaf8ad2a98b7969c') version('0.3', sha256='5044a253d223e2bb8502063cd03c0fe4db856467e497d650da7ccd8f75d0f8d9') depends_on('r@3.00:', type=('build', 'run')) - depends_on('r-dplyr', type=('build', 'run')) depends_on('r-httr', type=('build', 'run')) depends_on('r-jsonlite', type=('build', 'run')) depends_on('r-plyr', type=('build', 'run')) + depends_on('r-dplyr', type=('build', 'run')) depends_on('r-progress', type=('build', 'run')) - depends_on('r-purrr', type=('build', 'run')) depends_on('r-urltools', type=('build', 'run')) + depends_on('r-purrr', type=('build', 'run')) depends_on('r-xml2', type=('build', 'run')) + depends_on('r-tibble', when='@0.4:', type=('build', 'run')) + depends_on('r-tidyr', when='@0.4:', type=('build', 'run')) + depends_on('r-rlang', when='@0.4:', type=('build', 'run')) -- cgit v1.2.3-70-g09d2