From 756fb83f04cf6ba663030c01611c4664a9c12afd Mon Sep 17 00:00:00 2001 From: lingnanyuan <1297162327@qq.com> Date: Fri, 29 Sep 2017 17:06:27 -0500 Subject: r-a4classif: new package. (#5557) --- .../repos/builtin/packages/r-a4classif/package.py | 43 ++++++++++++++++++++++ 1 file changed, 43 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-a4classif/package.py diff --git a/var/spack/repos/builtin/packages/r-a4classif/package.py b/var/spack/repos/builtin/packages/r-a4classif/package.py new file mode 100644 index 0000000000..3fd06599e0 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-a4classif/package.py @@ -0,0 +1,43 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RA4classif(RPackage): + """Automated Affymetrix Array Analysis Classification Package.""" + + homepage = "https://www.bioconductor.org" + url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/a4Classif_1.24.0.tar.gz" + list_url = homepage + + version('1.24.0', 'b3367ba63a5d5a38d94e671d027098ff') + + depends_on('r-a4core', type=('build', 'run')) + depends_on('r-a4preproc', type=('build', 'run')) + depends_on('r-mlinterfaces', type=('build', 'run')) + depends_on('r-rocr', type=('build', 'run')) + depends_on('r-pamr', type=('build', 'run')) + depends_on('r-glmnet', type=('build', 'run')) + depends_on('r-varselrf', type=('build', 'run')) -- cgit v1.2.3-70-g09d2