From 86d2e1af973f0dd330cc65d401bfc3342ab1d391 Mon Sep 17 00:00:00 2001 From: George Young Date: Tue, 3 Oct 2023 19:26:49 +0100 Subject: falco: new package @1.2.1 (#40289) * falco: new package @1.2.1 * specifying gmake * Replacing homepage - readthedocs is empty --------- Co-authored-by: LMS Bioinformatics --- var/spack/repos/builtin/packages/falco/package.py | 26 +++++++++++++++++++++++ 1 file changed, 26 insertions(+) create mode 100644 var/spack/repos/builtin/packages/falco/package.py diff --git a/var/spack/repos/builtin/packages/falco/package.py b/var/spack/repos/builtin/packages/falco/package.py new file mode 100644 index 0000000000..5acecbf5c0 --- /dev/null +++ b/var/spack/repos/builtin/packages/falco/package.py @@ -0,0 +1,26 @@ +# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Falco(AutotoolsPackage): + """A C++ drop-in replacement of FastQC to assess the quality of sequence read data""" + + homepage = "https://github.com/smithlabcode/falco" + url = "https://github.com/smithlabcode/falco/releases/download/v1.2.1/falco-1.2.1.tar.gz" + + version("1.2.1", sha256="33de8aafac45c7aea055ed7ab837d0a39d12dcf782816cea8a6c648acb911057") + + variant("htslib", default=False, description="Add support for BAM files") + + depends_on("gmake", type="build") + depends_on("zlib-ng") + depends_on("htslib", when="+htslib") + + def configure_args(self): + if self.spec.satisfies("+htslib"): + return ["--enable-htslib"] + return [] -- cgit v1.2.3-60-g2f50