From 8907e5293391f9d5256a757c47d9bd0c347311bb Mon Sep 17 00:00:00 2001 From: George Young Date: Thu, 8 Jun 2023 16:49:00 +0100 Subject: bismark: add 0.24.1, add HISAT2 dependency (#38210) Co-authored-by: LMS Bioinformatics --- var/spack/repos/builtin/packages/bismark/package.py | 2 ++ 1 file changed, 2 insertions(+) diff --git a/var/spack/repos/builtin/packages/bismark/package.py b/var/spack/repos/builtin/packages/bismark/package.py index 85a967b8b0..5a5c7d6cc0 100644 --- a/var/spack/repos/builtin/packages/bismark/package.py +++ b/var/spack/repos/builtin/packages/bismark/package.py @@ -13,6 +13,7 @@ class Bismark(Package): homepage = "https://www.bioinformatics.babraham.ac.uk/projects/bismark" url = "https://github.com/FelixKrueger/Bismark/archive/0.23.0.tar.gz" + version("0.24.1", sha256="c5409f5fa470ea5ac07327ced28c60b793f5ef88c5a7bc75b71dde0f52f39894") version("0.23.0", sha256="ea1625808487c1442dbf825d9cbe5c0cbc37ea5bd1460f59e1e0ccc80cc01c9e") version("0.19.0", sha256="91707737f96a0574956a282b635abad7560e7d90bee188a67a7807b2470deae2") version("0.18.2", sha256="83391c5b5af33047178e7774ac25f5a69ce9315c13ae02f016baf7c50b73e702") @@ -20,6 +21,7 @@ class Bismark(Package): depends_on("bowtie2", type="run") depends_on("perl", type="run") depends_on("samtools", type="run") + depends_on("hisat2", type="run", when="@0.21.0:") def install(self, spec, prefix): mkdirp(prefix.bin) -- cgit v1.2.3-60-g2f50