From 89838bae1d1ad68959b9b5f473aaf78b41190cf3 Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Tue, 20 Apr 2021 04:36:08 -0500 Subject: r-champdata: new package (#23093) --- .../repos/builtin/packages/r-champdata/package.py | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-champdata/package.py diff --git a/var/spack/repos/builtin/packages/r-champdata/package.py b/var/spack/repos/builtin/packages/r-champdata/package.py new file mode 100644 index 0000000000..261463286d --- /dev/null +++ b/var/spack/repos/builtin/packages/r-champdata/package.py @@ -0,0 +1,21 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RChampdata(RPackage): + """Packages for ChAMP package: + + Provides datasets needed for ChAMP including a test dataset and blood + controls for CNA analysis.""" + + bioc = "ChAMPdata" + + version('2.22.0', commit='eeedd4c477fac79f00743da8ff7da064221c5f3d') + + depends_on('r@3.3:', type=('build', 'run')) + depends_on('r-genomicranges@1.22.4:', type=('build', 'run')) + depends_on('r-biocgenerics@0.16.1:', type=('build', 'run')) -- cgit v1.2.3-70-g09d2