From b09fb467f162e30903acf6ddc7a12a2969147b68 Mon Sep 17 00:00:00 2001 From: dlkuehn Date: Thu, 14 Apr 2022 12:02:06 -0500 Subject: Package rna-seqc: Change jdk dependency to java (#30049) Co-authored-by: David Kuehn --- var/spack/repos/builtin/packages/rna-seqc/package.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/var/spack/repos/builtin/packages/rna-seqc/package.py b/var/spack/repos/builtin/packages/rna-seqc/package.py index c4d9b3b269..0fe64296ab 100644 --- a/var/spack/repos/builtin/packages/rna-seqc/package.py +++ b/var/spack/repos/builtin/packages/rna-seqc/package.py @@ -21,7 +21,7 @@ class RnaSeqc(Package): version('1.1.5', sha256='1da100182037f46c61f93a063083e3be579da2678b0441fbc3fc8b58120e52c9', expand=False) version('1.1.4', sha256='eac437061157036dddf496be8e05fe62b011fb95d34e9079c93ee4001710f1c6', expand=False) - depends_on('jdk@8:', type='run') + depends_on('java@8:', type='run') def install(self, spec, prefix): mkdirp(prefix.bin) @@ -37,7 +37,7 @@ class RnaSeqc(Package): # Munge the helper script to explicitly point to java and the # jar file. - java = self.spec['jdk'].prefix.bin.java + java = self.spec['java'].prefix.bin.java kwargs = {'ignore_absent': False, 'backup': False, 'string': False} filter_file('^java', java, script, **kwargs) filter_file('RNA-SeQC_v{0}.jar', join_path(prefix.bin, jar_file), -- cgit v1.2.3-70-g09d2