From f24465349624fcd5d986b5d95587ea7164177485 Mon Sep 17 00:00:00 2001 From: lingnanyuan <1297162327@qq.com> Date: Fri, 27 Oct 2017 01:34:16 -0500 Subject: r-category: Create new package. (#5959) --- .../repos/builtin/packages/r-category/package.py | 46 ++++++++++++++++++++++ 1 file changed, 46 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-category/package.py diff --git a/var/spack/repos/builtin/packages/r-category/package.py b/var/spack/repos/builtin/packages/r-category/package.py new file mode 100644 index 0000000000..a0b1522c35 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-category/package.py @@ -0,0 +1,46 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RCategory(RPackage): + """A collection of tools for performing category analysis.""" + + homepage = "https://www.bioconductor.org/packages/Category/" + url = "https://git.bioconductor.org/packages/Category" + + version('2.42.1', git='https://git.bioconductor.org/packages/Category', commit='382c817a2371671a72f8f949dfb4050361ebabcd') + + depends_on('r@3.4.0:3.4.9', when='@2.42.1') + depends_on('r-biocgenerics', type=('build', 'run')) + depends_on('r-annotationdbi', type=('build', 'run')) + depends_on('r-biobase', type=('build', 'run')) + depends_on('r-matrix', type=('build', 'run')) + depends_on('r-graph', type=('build', 'run')) + depends_on('r-rbgl', type=('build', 'run')) + depends_on('r-gseabase', type=('build', 'run')) + depends_on('r-genefilter', type=('build', 'run')) + depends_on('r-annotate', type=('build', 'run')) + depends_on('r-dbi', type=('build', 'run')) -- cgit v1.2.3-70-g09d2