From 8815f0a0b5d557b871b1ca01084aec18379c112b Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Sun, 31 Jul 2016 17:12:29 -0500 Subject: New package - r-ncdf4 Interface to Unidata netCDF (version 4 or earlier) format data files. --- .../repos/builtin/packages/r-ncdf4/package.py | 56 ++++++++++++++++++++++ 1 file changed, 56 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-ncdf4/package.py diff --git a/var/spack/repos/builtin/packages/r-ncdf4/package.py b/var/spack/repos/builtin/packages/r-ncdf4/package.py new file mode 100644 index 0000000000..11bf7abb38 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-ncdf4/package.py @@ -0,0 +1,56 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the LICENSE file for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RNcdf4(Package): + """Provides a high-level R interface to data files written using Unidata's + netCDF library (version 4 or earlier), which are binary data files that are + portable across platforms and include metadata information in addition to + the data sets. Using this package, netCDF files (either version 4 or + "classic" version 3) can be opened and data sets read in easily. It is also + easy to create new netCDF dimensions, variables, and files, in either + version 3 or 4 format, and manipulate existing netCDF files. This package + replaces the former ncdf package, which only worked with netcdf version 3 + files. For various reasons the names of the functions have had to be + changed from the names in the ncdf package. The old ncdf package is still + available at the URL given below, if you need to have backward + compatibility. It should be possible to have both the ncdf and ncdf4 + packages installed simultaneously without a problem. However, the ncdf + package does not provide an interface for netcdf version 4 files.""" + + homepage = "http://cirrus.ucsd.edu/~pierce/ncdf" + url = "https://cran.r-project.org/src/contrib/ncdf4_1.15.tar.gz" + list_url = "https://cran.r-project.org/src/contrib/Archive/ncdf4" + + version('1.15', 'cd60dadbae3be31371e1ed40ddeb420a') + + extends('R') + + depends_on('netcdf') + + def install(self, spec, prefix): + R('CMD', 'INSTALL', '--library={0}'.format(self.module.r_lib_dir), + self.stage.source_path) -- cgit v1.2.3-70-g09d2