From 11bd795ca889536d79295e7fbed9495cb75390fe Mon Sep 17 00:00:00 2001
From: Justin S <3630356+codeandkey@users.noreply.github.com>
Date: Wed, 15 May 2019 16:04:17 -0500
Subject: repeatscout: new package at 1.0.5 (#11409)

* repeatscout: new package at 1.0.5

* repeatscout: add trf runtime dependency

* repeatscout: add nseg runtime dependency
---
 .../repos/builtin/packages/repeatscout/package.py  | 24 ++++++++++++++++++++++
 1 file changed, 24 insertions(+)
 create mode 100644 var/spack/repos/builtin/packages/repeatscout/package.py

(limited to 'var')

diff --git a/var/spack/repos/builtin/packages/repeatscout/package.py b/var/spack/repos/builtin/packages/repeatscout/package.py
new file mode 100644
index 0000000000..005650ab0d
--- /dev/null
+++ b/var/spack/repos/builtin/packages/repeatscout/package.py
@@ -0,0 +1,24 @@
+# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+# See the Spack documentation for more information on packaging.
+
+from spack import *
+
+
+class Repeatscout(MakefilePackage):
+    """RepeatScout - De Novo Repeat Finder, Price A.L., Jones N.C. and Pevzner
+       P.A."""
+
+    homepage = "http://www.repeatmasker.org/RepeatModeler/"
+    url      = "http://www.repeatmasker.org/RepeatScout-1.0.5.tar.gz"
+
+    version('1.0.5', sha256='bda6f782382f2b7dcb6a004b7da586d5046b3c12429b158e24787be62de6199c')
+
+    depends_on('perl', type='run')
+    depends_on('trf', type='run')
+    depends_on('nseg', type='run')
+
+    def edit(self, spec, prefix):
+        filter_file('^INSTDIR.*$', 'INSTDIR=%s' % prefix.bin, 'Makefile')
-- 
cgit v1.2.3-60-g2f50