From 15111177a2a62139d02d9aff257e577fb9cf2fdc Mon Sep 17 00:00:00 2001 From: Eric Date: Tue, 9 Jan 2018 12:57:58 -0600 Subject: prodigal: Create new package (#6870) --- .../repos/builtin/packages/prodigal/package.py | 41 ++++++++++++++++++++++ 1 file changed, 41 insertions(+) create mode 100644 var/spack/repos/builtin/packages/prodigal/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/prodigal/package.py b/var/spack/repos/builtin/packages/prodigal/package.py new file mode 100644 index 0000000000..b57f712397 --- /dev/null +++ b/var/spack/repos/builtin/packages/prodigal/package.py @@ -0,0 +1,41 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/spack/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Prodigal(MakefilePackage): + """Fast, reliable protein-coding gene prediction for prokaryotic + genomes.""" + + homepage = "https://github.com/hyattpd/Prodigal" + url = "https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz" + + version('2.6.3', '5181809fdb740e9a675cfdbb6c038466') + + def install(self, spec, prefix): + make('INSTALLDIR={0}'.format(self.prefix), 'install') + + def setup_environment(self, spack_env, run_env): + run_env.prepend_path('PATH', prefix) -- cgit v1.2.3-60-g2f50