From 187dfb61a376172b6d7adb2e2df3884041a4413c Mon Sep 17 00:00:00 2001 From: Justin Stanley Date: Fri, 19 Oct 2018 20:01:55 -0500 Subject: new package: trimal (starting at 1.4.1) (#9592) --- var/spack/repos/builtin/packages/trimal/package.py | 25 ++++++++++++++++++++++ 1 file changed, 25 insertions(+) create mode 100644 var/spack/repos/builtin/packages/trimal/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/trimal/package.py b/var/spack/repos/builtin/packages/trimal/package.py new file mode 100644 index 0000000000..68d9efc6af --- /dev/null +++ b/var/spack/repos/builtin/packages/trimal/package.py @@ -0,0 +1,25 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Trimal(MakefilePackage): + """A tool for automated alignment trimming in large-scale + phylogenetic analyses""" + + homepage = "https://github.com/scapella/trimal" + url = "https://github.com/scapella/trimal/archive/v1.4.1.tar.gz" + + version('1.4.1', sha256='cb8110ca24433f85c33797b930fa10fe833fa677825103d6e7f81dd7551b9b4e') + + build_directory = 'source' + + def install(self, sinstall_treepec, prefix): + mkdirp(prefix.bin) + binaries = ['trimal', 'readal', 'statal'] + with working_dir(self.build_directory): + for b in binaries: + install(b, prefix.bin) -- cgit v1.2.3-60-g2f50