From 28982bd1035f2d6393b94acd1d1b797d6f54807a Mon Sep 17 00:00:00 2001 From: Eric Date: Mon, 14 May 2018 13:00:03 -0500 Subject: r-picante: Create new package (#8117) * r-picante: Create new package * Remove dependency already included in RPackage base class --- .../repos/builtin/packages/r-picante/package.py | 40 ++++++++++++++++++++++ 1 file changed, 40 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-picante/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/r-picante/package.py b/var/spack/repos/builtin/packages/r-picante/package.py new file mode 100644 index 0000000000..d213bfea8e --- /dev/null +++ b/var/spack/repos/builtin/packages/r-picante/package.py @@ -0,0 +1,40 @@ +############################################################################## +# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/spack/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RPicante(RPackage): + """R tools for integrating phylogenies and ecology""" + + homepage = "https://cran.r-project.org/package=picante" + url = "https://cran.r-project.org/src/contrib/picante_1.6-2.tar.gz" + list_url = "https://cran.r-project.org/src/contrib/Archive/picante" + + version('1.6-2', 'e3eba6ef254068d2cfa9e96760bcd7a3') + version('1.6-1', '73d86b90eceda582654e995d47236d6e') + + depends_on('r-ape', type=('build', 'run')) + depends_on('r-nlme', type=('build', 'run')) + depends_on('r-vegan', type=('build', 'run')) -- cgit v1.2.3-70-g09d2