From 294a91b580429f6476bb6a38a89127dbd87ca661 Mon Sep 17 00:00:00 2001 From: Justin S <3630356+codeandkey@users.noreply.github.com> Date: Mon, 18 May 2020 16:37:06 -0500 Subject: r-decipher: new package at 2.12.0 (#16705) --- .../repos/builtin/packages/r-decipher/package.py | 27 ++++++++++++++++++++++ 1 file changed, 27 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-decipher/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/r-decipher/package.py b/var/spack/repos/builtin/packages/r-decipher/package.py new file mode 100644 index 0000000000..d4d2a881b8 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-decipher/package.py @@ -0,0 +1,27 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RDecipher(RPackage): + """Tools for curating, analyzing, and manipulating biological sequences.""" + + homepage = "https://bioconductor.org/packages/DECIPHER" + git = "https://git.bioconductor.org/packages/DECIPHER.git" + + version('2.12.0', commit='658ae23870383b25b96a03a18d4ecac228a2650f') + version('2.10.2', commit='db7b017c9050a7ec1d4daa15352994890095e9c3') + version('2.8.1', commit='35aa66f48e06b93a98d1060c90c44d34ce05ccd9') + version('2.6.0', commit='ed9acaa35c8774cb0ea01cd7cc2e46d063d8c70e') + version('2.4.0', commit='1a57b8e4c7d7dec1c233f79c9a88d3705e0ad432') + + depends_on('r@3.3.0:', type=('build', 'run')) + depends_on('r-biostrings@2.35.12:', type=('build', 'run')) + depends_on('r-rsqlite@1.1:', type=('build', 'run')) + depends_on('r-dbi', type=('build', 'run')) + depends_on('r-s4vectors', type=('build', 'run')) + depends_on('r-iranges', type=('build', 'run')) + depends_on('r-xvector', type=('build', 'run')) -- cgit v1.2.3-70-g09d2