From 39ac8abbbd1bae825e24b0f399f7a1371509b04c Mon Sep 17 00:00:00 2001 From: George Hartzell Date: Tue, 23 May 2017 13:37:24 -0700 Subject: Add support for addl versions of bcl2fastq2 (#4328) Two changes: - It seems that Illumina version numbers are dotted and that the dashed version in the 2.18... filename is an anomaly (based on the names for 2.17.1.14 and 2.19.0). `url_for_version` does the right thing for 2.18. It will need to be fixed when support for 2.19 is added. 2.17 is no longer generally available so it gets a pass. - Add version and hash for 2.17.1.14. 2.17.1.14 is no longer distributed. If you have a copy of the source tarball, you can drop it into a local mirror w/ the name mirror/bcl2fastq2/bcl2fastq2-2.17.1.14.zip and go from there. --- var/spack/repos/builtin/packages/bcl2fastq2/package.py | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/bcl2fastq2/package.py b/var/spack/repos/builtin/packages/bcl2fastq2/package.py index 98799a1444..2aff74b8a8 100644 --- a/var/spack/repos/builtin/packages/bcl2fastq2/package.py +++ b/var/spack/repos/builtin/packages/bcl2fastq2/package.py @@ -39,7 +39,11 @@ class Bcl2fastq2(Package): homepage = "https://support.illumina.com/downloads/bcl2fastq-conversion-software-v2-18.html" url = "https://support.illumina.com/content/dam/illumina-support/documents/downloads/software/bcl2fastq/bcl2fastq2-v2-18-0-12-tar.zip" - version('2-18-0-12', 'fbe06492117f65609c41be0c27e3215c') + version('2.18.0.12', 'fbe06492117f65609c41be0c27e3215c') + # 2.17.1.14 is no longer distributed. If you have a copy of the + # source tarball, you can drop it into a local mirror w/ the name + # mirror/bcl2fastq2/bcl2fastq2-2.17.1.14.zip and go from there. + version('2.17.1.14', '7426226c6db095862e636b95c38608d3') depends_on('boost@1.54.0') depends_on('cmake@2.8.9:') -- cgit v1.2.3-70-g09d2