From 3fc8203b93c506bee105c18fdfcde73c44e81316 Mon Sep 17 00:00:00 2001 From: Ricardo Silva Date: Sat, 26 Jan 2019 16:21:04 +0100 Subject: bcftools: do not use bundled htslib (#10445) * if the path to htslib is not specified the bundled one is built instead * additionally this fixes the build with the intel compiler --- var/spack/repos/builtin/packages/bcftools/package.py | 6 ++++++ 1 file changed, 6 insertions(+) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/bcftools/package.py b/var/spack/repos/builtin/packages/bcftools/package.py index daaa383e38..34182f930d 100644 --- a/var/spack/repos/builtin/packages/bcftools/package.py +++ b/var/spack/repos/builtin/packages/bcftools/package.py @@ -32,3 +32,9 @@ class Bcftools(AutotoolsPackage): depends_on('htslib@1.4', when='@1.4') depends_on('htslib@1.3.1', when='@1.3.1') depends_on('htslib@1.2', when='@1.2') + + def configure_args(self): + args = [] + args.append('--with-htslib={0}'.format(self.spec['htslib'].prefix)) + + return args -- cgit v1.2.3-70-g09d2