From 4164c5d5e66d81026a8977cae168ca068615cde6 Mon Sep 17 00:00:00 2001 From: Audrey Thoma Date: Fri, 21 Jul 2017 15:35:47 -0500 Subject: smalt: new package (#4853) --- var/spack/repos/builtin/packages/smalt/package.py | 34 +++++++++++++++++++++++ 1 file changed, 34 insertions(+) create mode 100644 var/spack/repos/builtin/packages/smalt/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/smalt/package.py b/var/spack/repos/builtin/packages/smalt/package.py new file mode 100644 index 0000000000..c19f3d040a --- /dev/null +++ b/var/spack/repos/builtin/packages/smalt/package.py @@ -0,0 +1,34 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Smalt(AutotoolsPackage): + """SMALT aligns DNA sequencing reads with a reference genome.""" + + homepage = "http://www.sanger.ac.uk/science/tools/smalt-0" + url = "https://downloads.sourceforge.net/project/smalt/smalt-0.7.6.tar.gz" + + version('0.7.6', 'c3215d70ba960c8fdc8e80191695c60b') -- cgit v1.2.3-60-g2f50