From 4b1c356a27adc68e62d801986e67ef60336685db Mon Sep 17 00:00:00 2001 From: Justin S <3630356+codeandkey@users.noreply.github.com> Date: Tue, 14 Jan 2020 17:47:48 -0600 Subject: trnascan-se: add and configure infernal dependency (#14502) * trnascan-se: add and configure infernal dep * trnascan-se: use patch() for infernal config --- var/spack/repos/builtin/packages/trnascan-se/package.py | 7 +++++++ 1 file changed, 7 insertions(+) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/trnascan-se/package.py b/var/spack/repos/builtin/packages/trnascan-se/package.py index 8a3eea7ab6..cad1a15e90 100644 --- a/var/spack/repos/builtin/packages/trnascan-se/package.py +++ b/var/spack/repos/builtin/packages/trnascan-se/package.py @@ -13,3 +13,10 @@ class TrnascanSe(AutotoolsPackage): url = "http://trna.ucsc.edu/software/trnascan-se-2.0.0.tar.gz" version('2.0.0', sha256='0dde1c07142e4bf77b21d53ddf3eeb1ef8c52248005a42323d13f8d7c798100c') + + depends_on('infernal@1.1.2', type='run', when='@2.0.0') + + def patch(self): + filter_file('infernal_dir: {bin_dir}', + 'infernal_dir: %s' % self.spec['infernal'].prefix.bin, + 'tRNAscan-SE.conf.src', string=True) -- cgit v1.2.3-60-g2f50