From 4e1fdfeb18c7ce02a09103cff2b556cf15feee49 Mon Sep 17 00:00:00 2001 From: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> Date: Sun, 10 Oct 2021 02:14:13 +0200 Subject: py-nilearn: add 0.4.2 and 0.6.2 (#26635) --- .../repos/builtin/packages/py-nilearn/package.py | 77 +++++++++++++++++----- 1 file changed, 61 insertions(+), 16 deletions(-) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/py-nilearn/package.py b/var/spack/repos/builtin/packages/py-nilearn/package.py index 842859bff6..4006d37951 100644 --- a/var/spack/repos/builtin/packages/py-nilearn/package.py +++ b/var/spack/repos/builtin/packages/py-nilearn/package.py @@ -15,24 +15,69 @@ class PyNilearn(PythonPackage): version('0.8.1', sha256='a0489940855130f35bbc4cac0750479a6f82025215ea7b1d778faca064219298') version('0.8.0', sha256='f2d3dc81005f829f3a183efa6c90d698ea6818c06264d2e3f03e805c4340febb') version('0.7.1', sha256='8b1409a5e1f0f6d1a1f02555c2f11115a2364f45f1e57bcb5fb3c9ea11f346fa') + version('0.6.2', sha256='cfc6cfda59a6f4247189f8ccf92e364de450460a15c0ec21bdb857c420dd198c') + version('0.4.2', sha256='5049363eb6da2e7c35589477dfc79bf69929ca66de2d7ed2e9dc07acf78636f4') - depends_on('python@3.5:', type=('build', 'run')) - depends_on('python@3.6:', type=('build', 'run'), when='@0.8.0:') + depends_on('python@3.6:', when='@0.8:', type=('build', 'run')) + depends_on('python@3.5:', when='@0.6:', type=('build', 'run')) + depends_on('python@2.7:', type=('build', 'run')) depends_on('py-setuptools', type='build') variant('plotting', default=False, description='Enable plotting functionalities') - depends_on('py-numpy@1.16:', type=('build', 'run'), when='@0.8:') - depends_on('py-scipy@1.2:', type=('build', 'run'), when='@0.8:') - depends_on('py-scikit-learn@0.21:', type=('build', 'run'), when='@0.8:') - depends_on('py-joblib@0.12:', type=('build', 'run')) - depends_on('py-nibabel@2.5:', type=('build', 'run'), when='@0.8:') - depends_on('py-pandas@0.24.0:', type=('build', 'run'), when='@0.8:') - depends_on('py-requests@2:', type=('build', 'run')) - depends_on('py-matplotlib@2.0:', type=('build', 'run'), when='+plotting') - - depends_on('py-numpy@1.11:', type=('build', 'run'), when='@:0.7') - depends_on('py-scipy@0.19:', type=('build', 'run'), when='@:0.7') - depends_on('py-scikit-learn@0.19:', type=('build', 'run'), when='@:0.7') - depends_on('py-nibabel@2.0.2:', type=('build', 'run'), when='@:0.7') - depends_on('py-pandas@0.18.0:', type=('build', 'run'), when='@:0.7') + depends_on('py-numpy@1.16:', when='@0.8:', type=('build', 'run')) + depends_on('py-numpy@1.11:', when='@0.5:', type=('build', 'run')) + depends_on('py-numpy@1.6.1:', type=('build', 'run')) + depends_on('py-scipy@1.2:', when='@0.8:', type=('build', 'run')) + depends_on('py-scipy@0.19:', when='@0.6:', type=('build', 'run')) + depends_on('py-scipy@0.17:', when='@0.5:', type=('build', 'run')) + depends_on('py-scipy@0.14:', type=('build', 'run')) + depends_on('py-scikit-learn@0.21:', when='@0.8:', type=('build', 'run')) + depends_on('py-scikit-learn@0.19:', when='@0.7:', type=('build', 'run')) + # sklearn.linear_model.base was deprecated in py-scikit.learn@0.24 + depends_on('py-scikit-learn@0.19:0.23', when='@0.6.0:0.6', type=('build', 'run')) + # older py-nilearn versions use import sklearn.external.joblib which was + # deprecated in py-scikit-learn@0.23: + depends_on('py-scikit-learn@0.15:0.22', when='@:0.5', type=('build', 'run')) + depends_on('py-joblib@0.12:', when='@0.7:', type=('build', 'run')) + depends_on('py-joblib@0.11:', when='@0.6:', type=('build', 'run')) + depends_on('py-nibabel@2.5:', when='@0.8:', type=('build', 'run')) + depends_on('py-nibabel@2.0.2:', type=('build', 'run')) + depends_on('py-pandas@0.24.0:', when='@0.8:', type=('build', 'run')) + depends_on('py-pandas@0.18.0:', when='@0.7:', type=('build', 'run')) + depends_on('py-requests@2:', when='@0.7:', type=('build', 'run')) + + depends_on('py-matplotlib@2.0:', when='@0.6: +plotting', type=('build', 'run')) + # older py-nilearn versions use matplotlib.cm.revcmap which was deprecated + # in py-matplotlib@3.4: + depends_on('py-matplotlib@1.1.1:3.3', when='@:0.6 +plotting', type=('build', 'run')) + + @property + def import_modules(self): + modules = [ + 'nilearn', + 'nilearn.connectome', + 'nilearn.datasets', + 'nilearn.decoding', + 'nilearn.decomposition', + 'nilearn.image', + 'nilearn.input_data', + 'nilearn.masking', + 'nilearn.mass_univariate', + 'nilearn.regions', + 'nilearn.signal', + 'nilearn.surface', + ] + + if self.spec.satisfies('@0.6:'): + modules.append('nilearn.externals') + + if self.spec.satisfies('@0.7:'): + modules.append('nilearn.glm') + + if '+plotting' in self.spec: + modules.append('nilearn.plotting') + if self.spec.satisfies('@0.7:'): + modules.append('nilearn.reporting') + + return modules -- cgit v1.2.3-70-g09d2