From 6a2cfedc7ada67a9ae98f8a01114a011204fa612 Mon Sep 17 00:00:00 2001 From: Audrey Thoma Date: Wed, 16 Aug 2017 19:34:43 -0500 Subject: gapcloser: new package (#5130) --- .../repos/builtin/packages/gapcloser/package.py | 39 ++++++++++++++++++++++ 1 file changed, 39 insertions(+) create mode 100644 var/spack/repos/builtin/packages/gapcloser/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/gapcloser/package.py b/var/spack/repos/builtin/packages/gapcloser/package.py new file mode 100644 index 0000000000..4505234756 --- /dev/null +++ b/var/spack/repos/builtin/packages/gapcloser/package.py @@ -0,0 +1,39 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Gapcloser(Package): + """The GapCloser is designed to close the gaps emerging during the + scaffolding process""" + + homepage = "https://sourceforge.net/projects/soapdenovo2/files/GapCloser/" + url = "https://downloads.sourceforge.net/project/soapdenovo2/GapCloser/bin/r6/GapCloser-bin-v1.12-r6.tgz" + + version('1.12-r6', '42b4e4256bdc9f9f31a391a359256209') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('GapCloser', prefix.bin) -- cgit v1.2.3-60-g2f50