From 7925705d1d3a1e45c39408d917c52bb34ce48a1e Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Tue, 20 Apr 2021 11:31:11 -0500 Subject: r-experimenthub: new package (#23095) --- .../builtin/packages/r-experimenthub/package.py | 29 ++++++++++++++++++++++ 1 file changed, 29 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-experimenthub/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/r-experimenthub/package.py b/var/spack/repos/builtin/packages/r-experimenthub/package.py new file mode 100644 index 0000000000..c3b76f2435 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-experimenthub/package.py @@ -0,0 +1,29 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class RExperimenthub(RPackage): + """Client to access ExperimentHub resources: + + This package provides a client for the Bioconductor ExperimentHub web + resource. ExperimentHub provides a central location where curated data from + experiments, publications or training courses can be accessed. Each + resource has associated metadata, tags and date of modification. The client + creates and manages a local cache of files retrieved enabling quick and + reproducible access.""" + + bioc = "ExperimentHub" + + version('1.16.1', commit='61d51b7ca968d6cc1befe299e0784d9a19ca51f6') + + depends_on('r-biocgenerics@0.15.10:', type=('build', 'run')) + depends_on('r-annotationhub@2.19.3:', type=('build', 'run')) + depends_on('r-biocfilecache@1.5.1:', type=('build', 'run')) + depends_on('r-s4vectors', type=('build', 'run')) + depends_on('r-biocmanager', type=('build', 'run')) + depends_on('r-curl', type=('build', 'run')) + depends_on('r-rappdirs', type=('build', 'run')) -- cgit v1.2.3-70-g09d2