From 7d97e8b0679d50f272c2a131482c352aa63adcf7 Mon Sep 17 00:00:00 2001
From: Peter Scheibel <scheibel1@llnl.gov>
Date: Tue, 6 Nov 2018 19:57:32 -0800
Subject: New repo for advanced packaging tutorial (#9711)
* modified tutorial packages
* update hint in hdf5 tutorial file (typo for suggested argument)
* add repo.yaml to tutorial repository
* update tutorial docs to refer user to tutorial package repository
* flake edits
* recommend site scope vs. defaults
* you don't specify the repo's name when adding a repo, just the path
---
.../repos/tutorial/packages/armadillo/package.py | 62 +++++
.../tutorial/packages/armadillo/undef_linux.patch | 4 +
var/spack/repos/tutorial/packages/elpa/package.py | 78 ++++++
...lt-obj-same-equivalence-same-common-block.patch | 16 ++
var/spack/repos/tutorial/packages/hdf5/package.py | 307 +++++++++++++++++++++
.../tutorial/packages/hdf5/pre-c99-comments.patch | 43 +++
.../tutorial/packages/mpich/mpich32_clang.patch | 13 +
var/spack/repos/tutorial/packages/mpich/package.py | 155 +++++++++++
.../tutorial/packages/netlib-lapack/ibm-xl.patch | 42 +++
.../tutorial/packages/netlib-lapack/package.py | 186 +++++++++++++
.../tutorial/packages/netlib-lapack/testing.patch | 13 +
.../netlib-lapack/undefined_declarations.patch | 26 ++
var/spack/repos/tutorial/repo.yaml | 2 +
13 files changed, 947 insertions(+)
create mode 100644 var/spack/repos/tutorial/packages/armadillo/package.py
create mode 100644 var/spack/repos/tutorial/packages/armadillo/undef_linux.patch
create mode 100644 var/spack/repos/tutorial/packages/elpa/package.py
create mode 100644 var/spack/repos/tutorial/packages/hdf5/h5f90global-mult-obj-same-equivalence-same-common-block.patch
create mode 100644 var/spack/repos/tutorial/packages/hdf5/package.py
create mode 100644 var/spack/repos/tutorial/packages/hdf5/pre-c99-comments.patch
create mode 100644 var/spack/repos/tutorial/packages/mpich/mpich32_clang.patch
create mode 100644 var/spack/repos/tutorial/packages/mpich/package.py
create mode 100644 var/spack/repos/tutorial/packages/netlib-lapack/ibm-xl.patch
create mode 100644 var/spack/repos/tutorial/packages/netlib-lapack/package.py
create mode 100644 var/spack/repos/tutorial/packages/netlib-lapack/testing.patch
create mode 100644 var/spack/repos/tutorial/packages/netlib-lapack/undefined_declarations.patch
create mode 100644 var/spack/repos/tutorial/repo.yaml
(limited to 'var')
diff --git a/var/spack/repos/tutorial/packages/armadillo/package.py b/var/spack/repos/tutorial/packages/armadillo/package.py
new file mode 100644
index 0000000000..d95a61f67d
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/armadillo/package.py
@@ -0,0 +1,62 @@
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class Armadillo(CMakePackage):
+ """Armadillo is a high quality linear algebra library (matrix maths)
+ for the C++ language, aiming towards a good balance between speed and
+ ease of use.
+ """
+
+ homepage = "http://arma.sourceforge.net/"
+ url = "http://sourceforge.net/projects/arma/files/armadillo-7.200.1.tar.xz"
+
+ version('8.100.1', 'd9762d6f097e0451d0cfadfbda295e7c')
+ version('7.950.1', 'c06eb38b12cae49cab0ce05f96147147')
+ version('7.900.1', '5ef71763bd429a3d481499878351f3be')
+ version('7.500.0', '7d316fdf3c3c7ea92b64704180ae315d')
+ version('7.200.2', 'b21585372d67a8876117fd515d8cf0a2')
+ version('7.200.1', 'ed86d6df0058979e107502e1fe3e469e')
+
+ variant('hdf5', default=False, description='Include HDF5 support')
+
+ depends_on('cmake@2.8.12:', type='build')
+ depends_on('arpack-ng') # old arpack causes undefined symbols
+ depends_on('blas')
+ depends_on('lapack')
+ depends_on('superlu@5.2:')
+ depends_on('hdf5', when='+hdf5')
+
+ patch('undef_linux.patch', when='platform=linux')
+
+ def cmake_args(self):
+ spec = self.spec
+
+ # TUTORIAL: fix the lines below by adding the appropriate query to
+ # the right dependency. To ask a dependency, e.g. `blas`, for the
+ # list of libraries it provides it suffices to access its `libs`
+ # attribute:
+ #
+ # blas_libs = spec['blas'].libs
+ #
+ # The CMake variables below require a semicolon separated list:
+ #
+ # blas_libs.joined(';')
+
+ return [
+ # ARPACK support
+ '-DARPACK_LIBRARY={0}'.format('FIXME: arpack-ng'),
+ # BLAS support
+ '-DBLAS_LIBRARY={0}'.format('FIXME: blas'),
+ # LAPACK support
+ '-DLAPACK_LIBRARY={0}'.format('FIXME: lapack'),
+ # SuperLU support
+ '-DSuperLU_INCLUDE_DIR={0}'.format(spec['superlu'].prefix.include),
+ '-DSuperLU_LIBRARY={0}'.format('FIXME: superlu'),
+ # HDF5 support
+ '-DDETECT_HDF5={0}'.format('ON' if '+hdf5' in spec else 'OFF')
+ ]
diff --git a/var/spack/repos/tutorial/packages/armadillo/undef_linux.patch b/var/spack/repos/tutorial/packages/armadillo/undef_linux.patch
new file mode 100644
index 0000000000..68b434dca8
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/armadillo/undef_linux.patch
@@ -0,0 +1,4 @@
+--- a/include/armadillo_bits/compiler_setup.hpp
++++ b/include/armadillo_bits/compiler_setup.hpp
+@@ -0,0 +1 @@
++#undef linux
diff --git a/var/spack/repos/tutorial/packages/elpa/package.py b/var/spack/repos/tutorial/packages/elpa/package.py
new file mode 100644
index 0000000000..386295eea9
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/elpa/package.py
@@ -0,0 +1,78 @@
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class Elpa(AutotoolsPackage):
+ """Eigenvalue solvers for Petaflop-Applications (ELPA)"""
+
+ homepage = 'http://elpa.mpcdf.mpg.de/'
+ url = 'http://elpa.mpcdf.mpg.de/elpa-2015.11.001.tar.gz'
+
+ version('2018.05.001.rc1', 'ccd77bd8036988ee624f43c04992bcdd')
+ version('2017.11.001', '4a437be40cc966efb07aaab84c20cd6e', preferred=True)
+ version('2017.05.003', '7c8e5e58cafab212badaf4216695700f')
+ version('2017.05.002', 'd0abc1ac1f493f93bf5e30ec8ab155dc')
+ version('2016.11.001.pre', '5656fd066cf0dcd071dbcaf20a639b37')
+ version('2016.05.004', 'c0dd3a53055536fc3a2a221e78d8b376')
+ version('2016.05.003', '88a9f3f3bfb63e16509dd1be089dcf2c')
+ version('2015.11.001', 'de0f35b7ee7c971fd0dca35c900b87e6')
+
+ variant('openmp', default=False, description='Activates OpenMP support')
+ variant('optflags', default=True, description='Build with optimization flags')
+
+ depends_on('mpi')
+ depends_on('blas')
+ depends_on('lapack')
+ depends_on('scalapack')
+
+ def url_for_version(self, version):
+ t = 'http://elpa.mpcdf.mpg.de/html/Releases/{0}/elpa-{0}.tar.gz'
+ if version < Version('2016.05.003'):
+ t = 'http://elpa.mpcdf.mpg.de/elpa-{0}.tar.gz'
+ return t.format(str(version))
+
+ @property
+ def libs(self):
+ libname = 'libelpa_openmp' if '+openmp' in self.spec else 'libelpa'
+ return find_libraries(
+ libname, root=self.prefix, shared=True, recursive=True
+ )
+
+ build_directory = 'spack-build'
+
+ def setup_environment(self, spack_env, run_env):
+ # TUTORIAL: set the following environment variables:
+ #
+ # CC=spec['mpi'].mpicc
+ # FC=spec['mpi'].mpifc
+ # CXX=spec['mpi'].mpicxx
+ # SCALAPACK_LDFLAGS=spec['scalapack'].libs.joined()
+ #
+ # and append the following flags:
+ #
+ # LDFLAGS -> spec['lapack'].libs.search_flags
+ # LIBS -> spec['lapack'].libs.link_flags
+ pass
+
+ def configure_args(self):
+ # TODO: set optimum flags for platform+compiler combo, see
+ # https://github.com/hfp/xconfigure/tree/master/elpa
+ # also see:
+ # https://src.fedoraproject.org/cgit/rpms/elpa.git/
+ # https://packages.qa.debian.org/e/elpa.html
+ options = []
+ # without -march=native there is configure error for 2017.05.02
+ # Could not compile test program, try with --disable-sse, or
+ # adjust the C compiler or CFLAGS
+ if '+optflags' in self.spec:
+ options.extend([
+ 'FCFLAGS=-O2 -march=native -ffree-line-length-none',
+ 'CFLAGS=-O2 -march=native'
+ ])
+ if '+openmp' in self.spec:
+ options.append('--enable-openmp')
+ return options
diff --git a/var/spack/repos/tutorial/packages/hdf5/h5f90global-mult-obj-same-equivalence-same-common-block.patch b/var/spack/repos/tutorial/packages/hdf5/h5f90global-mult-obj-same-equivalence-same-common-block.patch
new file mode 100644
index 0000000000..8bf5c142e9
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/hdf5/h5f90global-mult-obj-same-equivalence-same-common-block.patch
@@ -0,0 +1,16 @@
+diff --git a/fortran/src/H5f90global.F90 b/fortran/src/H5f90global.F90
+index dd2b171..629418a 100644
+--- a/fortran/src/H5f90global.F90
++++ b/fortran/src/H5f90global.F90
+@@ -142,10 +142,7 @@ MODULE H5GLOBAL
+
+ INTEGER(HID_T), DIMENSION(PREDEF_TYPES_LEN) :: predef_types
+ EQUIVALENCE (predef_types(1), H5T_NATIVE_INTEGER_KIND(1))
+- EQUIVALENCE (predef_types(2), H5T_NATIVE_INTEGER_KIND(2))
+- EQUIVALENCE (predef_types(3), H5T_NATIVE_INTEGER_KIND(3))
+- EQUIVALENCE (predef_types(4), H5T_NATIVE_INTEGER_KIND(4))
+- EQUIVALENCE (predef_types(5), H5T_NATIVE_INTEGER_KIND(5))
++ ! EQUIVALENCE predef_types(2:5) are unnecessary and violate the standard
+ EQUIVALENCE (predef_types(6), H5T_NATIVE_INTEGER)
+ EQUIVALENCE (predef_types(7), H5T_NATIVE_REAL)
+ EQUIVALENCE (predef_types(8), H5T_NATIVE_DOUBLE)
diff --git a/var/spack/repos/tutorial/packages/hdf5/package.py b/var/spack/repos/tutorial/packages/hdf5/package.py
new file mode 100644
index 0000000000..b879d81f1c
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/hdf5/package.py
@@ -0,0 +1,307 @@
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+import shutil
+import sys
+
+from spack import *
+
+
+class Hdf5(AutotoolsPackage):
+ """HDF5 is a data model, library, and file format for storing and managing
+ data. It supports an unlimited variety of datatypes, and is designed for
+ flexible and efficient I/O and for high volume and complex data.
+ """
+
+ homepage = "https://support.hdfgroup.org/HDF5/"
+ url = "https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.1/src/hdf5-1.10.1.tar.gz"
+ list_url = "https://support.hdfgroup.org/ftp/HDF5/releases"
+ list_depth = 3
+
+ version('1.10.4', '8f60dc4dd6ab5fcd23c750d1dc5bca3d0453bdce5c8cdaf0a4a61a9d1122adb2')
+ version('1.10.3', 'b600d7c914cfa80ae127cd1a1539981213fee9994ac22ebec9e3845e951d9b39')
+ version('1.10.2', '8d4eae84e533efa57496638fd0dca8c3')
+ version('1.10.1', '43a2f9466702fb1db31df98ae6677f15')
+ version('1.10.0-patch1', '9180ff0ef8dc2ef3f61bd37a7404f295')
+ version('1.10.0', 'bdc935337ee8282579cd6bc4270ad199')
+ version('1.8.19', '7f568e2464d4ab0a74d16b23956d900b')
+ version('1.8.18', 'dd2148b740713ca0295442ec683d7b1c')
+ version('1.8.17', '7d572f8f3b798a628b8245af0391a0ca')
+ version('1.8.16', 'b8ed9a36ae142317f88b0c7ef4b9c618')
+ version('1.8.15', '03cccb5b33dbe975fdcd8ae9dc021f24')
+ version('1.8.14', 'a482686e733514a51cde12d6fe5c5d95')
+ version('1.8.13', 'c03426e9e77d7766944654280b467289')
+ version('1.8.12', 'd804802feb99b87fc668a90e6fa34411')
+ version('1.8.10', '710aa9fb61a51d61a7e2c09bf0052157')
+
+ variant('debug', default=False,
+ description='Builds a debug version of the library')
+ variant('shared', default=True,
+ description='Builds a shared version of the library')
+
+ variant('hl', default=False, description='Enable the high-level library')
+ variant('cxx', default=False, description='Enable C++ support')
+ variant('fortran', default=False, description='Enable Fortran support')
+ variant('threadsafe', default=False,
+ description='Enable thread-safe capabilities')
+
+ variant('mpi', default=True, description='Enable MPI support')
+ variant('szip', default=False, description='Enable szip support')
+ variant('pic', default=True,
+ description='Produce position-independent code (for shared libs)')
+
+ depends_on('mpi', when='+mpi')
+ # numactl does not currently build on darwin
+ if sys.platform != 'darwin':
+ depends_on('numactl', when='+mpi+fortran')
+ depends_on('szip', when='+szip')
+ depends_on('zlib@1.1.2:')
+
+ # There are several officially unsupported combinations of the features:
+ # 1. Thread safety is not guaranteed via high-level C-API but in some cases
+ # it works.
+ # conflicts('+threadsafe+hl')
+
+ # 2. Thread safety is not guaranteed via Fortran (CXX) API, but it's
+ # possible for a dependency tree to contain a package that uses Fortran
+ # (CXX) API in a single thread and another one that uses low-level C-API
+ # in multiple threads. To allow for such scenarios, we don't specify the
+ # following conflicts.
+ # conflicts('+threadsafe+cxx')
+ # conflicts('+threadsafe+fortran')
+
+ # 3. Parallel features are not supported via CXX API, but for the reasons
+ # described in #2 we allow for such combination.
+ # conflicts('+mpi+cxx')
+
+ # There are known build failures with intel@18.0.1. This issue is
+ # discussed and patch is provided at
+ # https://software.intel.com/en-us/forums/intel-fortran-compiler-for-linux-and-mac-os-x/topic/747951.
+ patch('h5f90global-mult-obj-same-equivalence-same-common-block.patch',
+ when='@1.10.1%intel@18')
+
+ # Turn line comments into block comments to conform with pre-C99 language
+ # standards. Versions of hdf5 after 1.8.10 don't require this patch,
+ # either because they conform to pre-C99 or neglect to ask for pre-C99
+ # language standards from their compiler. The hdf5 build system adds
+ # the -ansi cflag (run 'man gcc' for info on -ansi) for some versions
+ # of some compilers (see hdf5-1.8.10/config/gnu-flags). The hdf5 build
+ # system does not provide an option to disable -ansi, but since the
+ # pre-C99 code is restricted to just five lines of line comments in
+ # three src files, this patch accomplishes the simple task of patching the
+ # three src files and leaves the hdf5 build system alone.
+ patch('pre-c99-comments.patch', when='@1.8.10')
+
+ # There are build errors with GCC 8, see
+ # https://forum.hdfgroup.org/t/1-10-2-h5detect-compile-error-gcc-8-1-0-on-centos-7-2-solved/4441
+ patch('https://salsa.debian.org/debian-gis-team/hdf5/raw/bf94804af5f80f662cad80a5527535b3c6537df6/debian/patches/gcc-8.patch', sha256='57cee5ff1992b4098eda079815c36fc2da9b10e00a9056df054f2384c4fc7523', when='@1.10.2%gcc@8:')
+
+ filter_compiler_wrappers('h5cc', 'h5c++', 'h5fc', relative_root='bin')
+
+ def url_for_version(self, version):
+ url = "https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-{0}/hdf5-{1}/src/hdf5-{1}.tar.gz"
+ return url.format(version.up_to(2), version)
+
+ @property
+ def libs(self):
+ """HDF5 can be queried for the following parameters:
+
+ - "hl": high-level interface
+ - "cxx": C++ APIs
+ - "fortran": Fortran APIs
+
+ :return: list of matching libraries
+ """
+ # This map contains a translation from query_parameters
+ # to the libraries needed
+ query2libraries = { # noqa: F841
+ tuple(): ['libhdf5'],
+ ('cxx', 'fortran', 'hl'): [
+ 'libhdf5hl_fortran',
+ 'libhdf5_hl_cpp',
+ 'libhdf5_hl',
+ 'libhdf5_fortran',
+ 'libhdf5',
+ ],
+ ('cxx', 'hl'): [
+ 'libhdf5_hl_cpp',
+ 'libhdf5_hl',
+ 'libhdf5',
+ ],
+ ('fortran', 'hl'): [
+ 'libhdf5hl_fortran',
+ 'libhdf5_hl',
+ 'libhdf5_fortran',
+ 'libhdf5',
+ ],
+ ('hl',): [
+ 'libhdf5_hl',
+ 'libhdf5',
+ ],
+ ('cxx', 'fortran'): [
+ 'libhdf5_fortran',
+ 'libhdf5_cpp',
+ 'libhdf5',
+ ],
+ ('cxx',): [
+ 'libhdf5_cpp',
+ 'libhdf5',
+ ],
+ ('fortran',): [
+ 'libhdf5_fortran',
+ 'libhdf5',
+ ]
+ }
+
+ # TUTORIAL: you need to fix the implementation below, and
+ # return the correct list of libraries according to the
+ # query parameters your dependency has used.
+ #
+ # You can retrieve the query parameters by doing
+ #
+ # query_parameters = self.spec.last_query.extra_parameters
+ #
+ # and use the map above to query the list of libraries you need
+ # to search.
+ #
+ # Finally uncomment the lines below to return a LibraryList
+ #
+ # shared = '+shared' in self.spec
+ # return find_libraries(
+ # libraries, root=self.prefix, shared=shared, recursive=True
+ # )
+ return []
+
+ @run_before('configure')
+ def fortran_check(self):
+ if '+fortran' in self.spec and not self.compiler.fc:
+ msg = 'cannot build a Fortran variant without a Fortran compiler'
+ raise RuntimeError(msg)
+
+ def configure_args(self):
+ # Always enable this option. This does not actually enable any
+ # features: it only *allows* the user to specify certain
+ # combinations of other arguments. Enabling it just skips a
+ # sanity check in configure, so this doesn't merit a variant.
+ extra_args = ['--enable-unsupported']
+ extra_args += self.enable_or_disable('threadsafe')
+ extra_args += self.enable_or_disable('cxx')
+ extra_args += self.enable_or_disable('hl')
+ extra_args += self.enable_or_disable('fortran')
+
+ if '+szip' in self.spec:
+ extra_args.append('--with-szlib=%s' % self.spec['szip'].prefix)
+ else:
+ extra_args.append('--without-szlib')
+
+ if self.spec.satisfies('@1.10:'):
+ if '+debug' in self.spec:
+ extra_args.append('--enable-build-mode=debug')
+ else:
+ extra_args.append('--enable-build-mode=production')
+ else:
+ if '+debug' in self.spec:
+ extra_args.append('--enable-debug=all')
+ else:
+ extra_args.append('--enable-production')
+
+ # '--enable-fortran2003' no longer exists as of version 1.10.0
+ if '+fortran' in self.spec:
+ extra_args.append('--enable-fortran2003')
+ else:
+ extra_args.append('--disable-fortran2003')
+
+ if '+shared' in self.spec:
+ extra_args.append('--enable-shared')
+ else:
+ extra_args.append('--disable-shared')
+ extra_args.append('--enable-static-exec')
+
+ if '+pic' in self.spec:
+ extra_args += ['%s=%s' % (f, self.compiler.pic_flag)
+ for f in ['CFLAGS', 'CXXFLAGS', 'FCFLAGS']]
+
+ if '+mpi' in self.spec:
+ # The HDF5 configure script warns if cxx and mpi are enabled
+ # together. There doesn't seem to be a real reason for this, except
+ # that parts of the MPI interface are not accessible via the C++
+ # interface. Since they are still accessible via the C interface,
+ # this is not actually a problem.
+ extra_args += ['--enable-parallel',
+ 'CC=%s' % self.spec['mpi'].mpicc]
+
+ if '+cxx' in self.spec:
+ extra_args.append('CXX=%s' % self.spec['mpi'].mpicxx)
+
+ if '+fortran' in self.spec:
+ extra_args.append('FC=%s' % self.spec['mpi'].mpifc)
+
+ extra_args.append('--with-zlib=%s' % self.spec['zlib'].prefix)
+
+ return extra_args
+
+ @run_after('configure')
+ def patch_postdeps(self):
+ if '@:1.8.14' in self.spec:
+ # On Ubuntu14, HDF5 1.8.12 (and maybe other versions)
+ # mysteriously end up with "-l -l" in the postdeps in the
+ # libtool script. Patch this by removing the spurious -l's.
+ filter_file(
+ r'postdeps="([^"]*)"',
+ lambda m: 'postdeps="%s"' % ' '.join(
+ arg for arg in m.group(1).split(' ') if arg != '-l'),
+ 'libtool')
+
+ @run_after('install')
+ @on_package_attributes(run_tests=True)
+ def check_install(self):
+ # Build and run a small program to test the installed HDF5 library
+ spec = self.spec
+ print("Checking HDF5 installation...")
+ checkdir = "spack-check"
+ with working_dir(checkdir, create=True):
+ source = r"""
+#include <hdf5.h>
+#include <assert.h>
+#include <stdio.h>
+int main(int argc, char **argv) {
+ unsigned majnum, minnum, relnum;
+ herr_t herr = H5get_libversion(&majnum, &minnum, &relnum);
+ assert(!herr);
+ printf("HDF5 version %d.%d.%d %u.%u.%u\n", H5_VERS_MAJOR, H5_VERS_MINOR,
+ H5_VERS_RELEASE, majnum, minnum, relnum);
+ return 0;
+}
+"""
+ expected = """\
+HDF5 version {version} {version}
+""".format(version=str(spec.version.up_to(3)))
+ with open("check.c", 'w') as f:
+ f.write(source)
+ if '+mpi' in spec:
+ cc = Executable(spec['mpi'].mpicc)
+ else:
+ cc = Executable(self.compiler.cc)
+ cc(*(['-c', "check.c"] + spec['hdf5'].headers.cpp_flags.split()))
+ cc(*(['-o', "check",
+ "check.o"] + spec['hdf5'].libs.ld_flags.split()))
+ try:
+ check = Executable('./check')
+ output = check(output=str)
+ except ProcessError:
+ output = ""
+ success = output == expected
+ if not success:
+ print("Produced output does not match expected output.")
+ print("Expected output:")
+ print('-' * 80)
+ print(expected)
+ print('-' * 80)
+ print("Produced output:")
+ print('-' * 80)
+ print(output)
+ print('-' * 80)
+ raise RuntimeError("HDF5 install check failed")
+ shutil.rmtree(checkdir)
diff --git a/var/spack/repos/tutorial/packages/hdf5/pre-c99-comments.patch b/var/spack/repos/tutorial/packages/hdf5/pre-c99-comments.patch
new file mode 100644
index 0000000000..97743e8fa5
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/hdf5/pre-c99-comments.patch
@@ -0,0 +1,43 @@
+diff --git a/test/th5s.c b/test/th5s.c
+index 462bc36..8e18fad 100644
+--- a/test/th5s.c
++++ b/test/th5s.c
+@@ -730,8 +730,8 @@ test_h5s_zero_dim(void)
+ ret = H5Pset_chunk(plist_id, SPACE1_RANK, chunk_dims);
+ CHECK(ret, FAIL, "H5Pset_chunk");
+
+- // ret = H5Pset_alloc_time(plist_id, alloc_time);
+- // CHECK(ret, FAIL, "H5Pset_alloc_time");
++ /* ret = H5Pset_alloc_time(plist_id, alloc_time); */
++ /* CHECK(ret, FAIL, "H5Pset_alloc_time"); */
+
+ dset1 = H5Dcreate2(fid1, BASICDATASET1, H5T_NATIVE_INT, sid_chunk, H5P_DEFAULT, plist_id, H5P_DEFAULT);
+ CHECK(dset1, FAIL, "H5Dcreate2");
+diff --git a/tools/h5dump/h5dump_ddl.c b/tools/h5dump/h5dump_ddl.c
+index ee6de5e..3ed6045 100644
+--- a/tools/h5dump/h5dump_ddl.c
++++ b/tools/h5dump/h5dump_ddl.c
+@@ -1341,8 +1341,8 @@ handle_attributes(hid_t fid, const char *attr, void UNUSED * data, int UNUSED pe
+ string_dataformat.do_escape = display_escape;
+ outputformat = &string_dataformat;
+
+- //attr_name = attr + j + 1;
+- // need to replace escape characters
++ /* attr_name = attr + j + 1; */
++ /* need to replace escape characters */
+ attr_name = h5tools_str_replace(attr + j + 1, "\\/", "/");
+
+
+diff --git a/tools/lib/h5tools_str.c b/tools/lib/h5tools_str.c
+index 9ce3524..3b4e5e7 100644
+--- a/tools/lib/h5tools_str.c
++++ b/tools/lib/h5tools_str.c
+@@ -632,7 +632,7 @@ h5tools_str_indent(h5tools_str_t *str, const h5tool_format_t *info,
+ h5tools_str_append(str, "%s", OPT(info->line_indent, ""));
+ }
+
+-// ctx->need_prefix = 0;
++/* ctx->need_prefix = 0; */
+ }
+
+ /*-------------------------------------------------------------------------
diff --git a/var/spack/repos/tutorial/packages/mpich/mpich32_clang.patch b/var/spack/repos/tutorial/packages/mpich/mpich32_clang.patch
new file mode 100644
index 0000000000..01243072f7
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/mpich/mpich32_clang.patch
@@ -0,0 +1,13 @@
+diff --git a/src/include/mpiimpl.h b/src/include/mpiimpl.h
+index e705e5d..3bfcbee 100644
+--- a/src/include/mpiimpl.h
++++ b/src/include/mpiimpl.h
+@@ -1528,7 +1528,7 @@ typedef struct MPID_Request {
+ #ifdef MPID_DEV_REQUEST_DECL
+ MPID_DEV_REQUEST_DECL
+ #endif
+-} MPID_Request ATTRIBUTE((__aligned__(32)));
++} ATTRIBUTE((__aligned__(32))) MPID_Request;
+
+ extern MPIU_Object_alloc_t MPID_Request_mem;
+ /* Preallocated request objects */
diff --git a/var/spack/repos/tutorial/packages/mpich/package.py b/var/spack/repos/tutorial/packages/mpich/package.py
new file mode 100644
index 0000000000..c3e0b8a54b
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/mpich/package.py
@@ -0,0 +1,155 @@
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+import os
+
+
+class Mpich(AutotoolsPackage):
+ """MPICH is a high performance and widely portable implementation of
+ the Message Passing Interface (MPI) standard."""
+
+ homepage = "http://www.mpich.org"
+ url = "http://www.mpich.org/static/downloads/3.0.4/mpich-3.0.4.tar.gz"
+ git = "https://github.com/pmodels/mpich.git"
+ list_url = "http://www.mpich.org/static/downloads/"
+ list_depth = 1
+
+ version('develop', submodules=True)
+ version('3.2.1', 'e175452f4d61646a52c73031683fc375')
+ version('3.2', 'f414cfa77099cd1fa1a5ae4e22db508a')
+ version('3.1.4', '2ab544607986486562e076b83937bba2')
+ version('3.1.3', '93cb17f91ac758cbf9174ecb03563778')
+ version('3.1.2', '7fbf4b81dcb74b07ae85939d1ceee7f1')
+ version('3.1.1', '40dc408b1e03cc36d80209baaa2d32b7')
+ version('3.1', '5643dd176499bfb7d25079aaff25f2ec')
+ version('3.0.4', '9c5d5d4fe1e17dd12153f40bc5b6dbc0')
+
+ variant('hydra', default=True, description='Build the hydra process manager')
+ variant('pmi', default=True, description='Build with PMI support')
+ variant('romio', default=True, description='Enable ROMIO MPI I/O implementation')
+ variant('verbs', default=False, description='Build support for OpenFabrics verbs.')
+ variant(
+ 'device',
+ default='ch3',
+ description='''Abstract Device Interface (ADI)
+implementation. The ch4 device is currently in experimental state''',
+ values=('ch3', 'ch4'),
+ multi=False
+ )
+ variant(
+ 'netmod',
+ default='tcp',
+ description='''Network module. Only single netmod builds are
+supported. For ch3 device configurations, this presumes the
+ch3:nemesis communication channel. ch3:sock is not supported by this
+spack package at this time.''',
+ values=('tcp', 'mxm', 'ofi', 'ucx'),
+ multi=False
+ )
+
+ provides('mpi')
+ provides('mpi@:3.0', when='@3:')
+ provides('mpi@:1.3', when='@1:')
+
+ filter_compiler_wrappers(
+ 'mpicc', 'mpicxx', 'mpif77', 'mpif90', 'mpifort', relative_root='bin'
+ )
+
+ # fix MPI_Barrier segmentation fault
+ # see https://lists.mpich.org/pipermail/discuss/2016-May/004764.html
+ # and https://lists.mpich.org/pipermail/discuss/2016-June/004768.html
+ patch('mpich32_clang.patch', when='@3.2:3.2.0%clang')
+
+ depends_on('findutils', type='build')
+
+ depends_on('libfabric', when='netmod=ofi')
+
+ conflicts('device=ch4', when='@:3.2')
+ conflicts('netmod=ofi', when='@:3.1.4')
+ conflicts('netmod=ucx', when='device=ch3')
+ conflicts('netmod=mxm', when='device=ch4')
+ conflicts('netmod=mxm', when='@:3.1.3')
+ conflicts('netmod=tcp', when='device=ch4')
+
+ def setup_dependent_environment(self, spack_env, run_env, dependent_spec):
+ # TUTORIAL: set the following variables for dependents:
+ #
+ # MPICC=join_path(self.prefix.bin, 'mpicc')
+ # MPICXX=join_path(self.prefix.bin, 'mpic++')
+ # MPIF77=join_path(self.prefix.bin, 'mpif77')
+ # MPIF90=join_path(self.prefix.bin, 'mpif90')
+ # MPICH_CC=spack_cc
+ # MPICH_CXX=spack_cxx
+ # MPICH_F77=spack_f77
+ # MPICH_F90=spack_fc
+ # MPICH_FC=spack_fc
+ pass
+
+ def setup_dependent_package(self, module, dependent_spec):
+ if 'platform=cray' in self.spec:
+ self.spec.mpicc = spack_cc
+ self.spec.mpicxx = spack_cxx
+ self.spec.mpifc = spack_fc
+ self.spec.mpif77 = spack_f77
+ else:
+ self.spec.mpicc = join_path(self.prefix.bin, 'mpicc')
+ self.spec.mpicxx = join_path(self.prefix.bin, 'mpic++')
+ self.spec.mpifc = join_path(self.prefix.bin, 'mpif90')
+ self.spec.mpif77 = join_path(self.prefix.bin, 'mpif77')
+
+ self.spec.mpicxx_shared_libs = [
+ join_path(self.prefix.lib, 'libmpicxx.{0}'.format(dso_suffix)),
+ join_path(self.prefix.lib, 'libmpi.{0}'.format(dso_suffix))
+ ]
+
+ def autoreconf(self, spec, prefix):
+ """Not needed usually, configure should be already there"""
+ # If configure exists nothing needs to be done
+ if os.path.exists(self.configure_abs_path):
+ return
+ # Else bootstrap with autotools
+ bash = which('bash')
+ bash('./autogen.sh')
+
+ @run_before('autoreconf')
+ def die_without_fortran(self):
+ # Until we can pass variants such as +fortran through virtual
+ # dependencies depends_on('mpi'), require Fortran compiler to
+ # avoid delayed build errors in dependents.
+ if (self.compiler.f77 is None) or (self.compiler.fc is None):
+ raise InstallError(
+ 'Mpich requires both C and Fortran compilers!'
+ )
+
+ def configure_args(self):
+ spec = self.spec
+ config_args = [
+ '--enable-shared',
+ '--with-pm={0}'.format('hydra' if '+hydra' in spec else 'no'),
+ '--with-pmi={0}'.format('yes' if '+pmi' in spec else 'no'),
+ '--{0}-romio'.format('enable' if '+romio' in spec else 'disable'),
+ '--{0}-ibverbs'.format('with' if '+verbs' in spec else 'without')
+ ]
+
+ # setup device configuration
+ device_config = ''
+ if 'device=ch4' in spec:
+ device_config = '--with-device=ch4:'
+ elif 'device=ch3' in spec:
+ device_config = '--with-device=ch3:nemesis:'
+
+ if 'netmod=ucx' in spec:
+ device_config += 'ucx'
+ elif 'netmod=ofi' in spec:
+ device_config += 'ofi'
+ elif 'netmod=mxm' in spec:
+ device_config += 'mxm'
+ elif 'netmod=tcp' in spec:
+ device_config += 'tcp'
+
+ config_args.append(device_config)
+
+ return config_args
diff --git a/var/spack/repos/tutorial/packages/netlib-lapack/ibm-xl.patch b/var/spack/repos/tutorial/packages/netlib-lapack/ibm-xl.patch
new file mode 100644
index 0000000000..c6fba2a028
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/netlib-lapack/ibm-xl.patch
@@ -0,0 +1,42 @@
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -62,7 +62,7 @@
+ set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -fp-model strict")
+ endif()
+ if("${CMAKE_Fortran_COMPILER}" MATCHES "xlf")
+- set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -qnosave -qstrict=none")
++ set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -qnosave -qstrict")
+ endif()
+ # Delete libmtsk in linking sequence for Sun/Oracle Fortran Compiler.
+ # This library is not present in the Sun package SolarisStudio12.3-linux-x86-bin
+
+--- a/CMAKE/CheckLAPACKCompilerFlags.cmake
++++ b/CMAKE/CheckLAPACKCompilerFlags.cmake
+@@ -43,12 +43,6 @@
+ if( "${CMAKE_Fortran_FLAGS}" MATCHES "-qflttrap=[a-zA-Z:]:enable" )
+ set( FPE_EXIT TRUE )
+ endif()
+-
+- if( NOT ("${CMAKE_Fortran_FLAGS}" MATCHES "-qfixed") )
+- message( STATUS "Enabling fixed format F90/F95 with -qfixed" )
+- set( CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} -qfixed"
+- CACHE STRING "Flags for Fortran compiler." FORCE )
+- endif()
+
+ # HP Fortran
+ elseif( CMAKE_Fortran_COMPILER_ID STREQUAL "HP" )
+
+--- a/CBLAS/CMakeLists.txt
++++ b/CBLAS/CMakeLists.txt
+@@ -12,8 +12,8 @@
+ SYMBOL_NAMESPACE "F77_")
+ if(NOT FortranCInterface_GLOBAL_FOUND OR NOT FortranCInterface_MODULE_FOUND)
+ message(WARNING "Reverting to pre-defined include/lapacke_mangling.h")
+- configure_file(include/lapacke_mangling_with_flags.h.in
+- ${LAPACK_BINARY_DIR}/include/lapacke_mangling.h)
++ configure_file(include/cblas_mangling_with_flags.h.in
++ ${LAPACK_BINARY_DIR}/include/cblas_mangling.h)
+ endif()
+
+ include_directories(include ${LAPACK_BINARY_DIR}/include)
+
diff --git a/var/spack/repos/tutorial/packages/netlib-lapack/package.py b/var/spack/repos/tutorial/packages/netlib-lapack/package.py
new file mode 100644
index 0000000000..ef43b8a2e0
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/netlib-lapack/package.py
@@ -0,0 +1,186 @@
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class NetlibLapack(CMakePackage):
+ """LAPACK version 3.X is a comprehensive FORTRAN library that does
+ linear algebra operations including matrix inversions, least squared
+ solutions to linear sets of equations, eigenvector analysis, singular
+ value decomposition, etc. It is a very comprehensive and reputable
+ package that has found extensive use in the scientific community.
+
+ """
+ homepage = "http://www.netlib.org/lapack/"
+ url = "http://www.netlib.org/lapack/lapack-3.5.0.tgz"
+
+ version('3.8.0', '96591affdbf58c450d45c1daa540dbd2',
+ url='http://www.netlib.org/lapack/lapack-3.8.0.tar.gz')
+ version('3.7.1', 'dcdeeed73de152c4643ccc5b1aeb453c')
+ version('3.7.0', '697bb8d67c7d336a0f339cc9dd0fa72f')
+ version('3.6.1', '421b2cb72e15f237e144428f9c460ee0')
+ version('3.6.0', 'f2f6c67134e851fe189bb3ca1fbb5101')
+ version('3.5.0', 'b1d3e3e425b2e44a06760ff173104bdf')
+ version('3.4.2', '61bf1a8a4469d4bdb7604f5897179478')
+ version('3.4.1', '44c3869c38c8335c2b9c2a8bb276eb55')
+ version('3.4.0', '02d5706ec03ba885fc246e5fa10d8c70')
+ version('3.3.1', 'd0d533ec9a5b74933c2a1e84eedc58b4')
+
+ variant('shared', default=True, description="Build shared library version")
+ variant('external-blas', default=False,
+ description='Build lapack with an external blas')
+
+ variant('lapacke', default=True,
+ description='Activates the build of the LAPACKE C interface')
+ variant('xblas', default=False,
+ description='Builds extended precision routines using XBLAS')
+
+ patch('ibm-xl.patch', when='@3.7: %xl')
+ patch('ibm-xl.patch', when='@3.7: %xl_r')
+
+ # https://github.com/Reference-LAPACK/lapack/issues/228
+ # TODO: update 'when' once the version of lapack
+ # containing the fix is released and added to Spack.
+ patch('undefined_declarations.patch', when='@3.8.0:')
+
+ # https://github.com/Reference-LAPACK/lapack/pull/268
+ # TODO: update 'when' once the version of lapack
+ # containing the fix is released and added to Spack.
+ patch('testing.patch', when='@3.7.0:')
+
+ # virtual dependency
+ provides('blas', when='~external-blas')
+ provides('lapack')
+
+ depends_on('blas', when='+external-blas')
+ depends_on('netlib-xblas+fortran+plain_blas', when='+xblas')
+ depends_on('python@2.7:', type='test')
+
+ # We need to run every phase twice in order to get static and shared
+ # versions of the libraries. When ~shared, we run the default
+ # implementations of the CMakePackage's phases and get only one building
+ # directory 'spack-build-static' with -DBUILD_SHARED_LIBS:BOOL=OFF (see
+ # implementations of self.build_directory and self.cmake_args() below).
+ # When +shared, we run the overridden methods for the phases, each
+ # running the default implementation twice with different values for
+ # self._building_shared. As a result, we get two building directories:
+ # 'spack-build-static' with -DBUILD_SHARED_LIBS:BOOL=OFF and
+ # 'spack-build-shared' with -DBUILD_SHARED_LIBS:BOOL=ON.
+ _building_shared = False
+
+ def patch(self):
+ # Fix cblas CMakeLists.txt -- has wrong case for subdirectory name.
+ if self.spec.satisfies('@3.6.0:'):
+ filter_file(
+ '${CMAKE_CURRENT_SOURCE_DIR}/CMAKE/',
+ '${CMAKE_CURRENT_SOURCE_DIR}/cmake/',
+ 'CBLAS/CMakeLists.txt', string=True)
+
+ @property
+ def blas_libs(self):
+ shared = True if '+shared' in self.spec else False
+ query_parameters = self.spec.last_query.extra_parameters
+ query2libraries = {
+ tuple(): ['libblas'],
+ ('c', 'fortran'): [
+ 'libcblas',
+ 'libblas',
+ ],
+ ('c',): [
+ 'libcblas',
+ ],
+ ('fortran',): [
+ 'libblas',
+ ]
+ }
+ key = tuple(sorted(query_parameters))
+ libraries = query2libraries[key]
+ return find_libraries(
+ libraries, root=self.prefix, shared=shared, recursive=True
+ )
+
+ # TUTORIAL: add a proper `lapack_lib` property, along the lines
+ # of the `blas_lib` property above. The library that provides
+ # the lapack API is called `liblapack`.
+
+ @property
+ def headers(self):
+ include_dir = self.spec.prefix.include
+ cblas_h = join_path(include_dir, 'cblas.h')
+ lapacke_h = join_path(include_dir, 'lapacke.h')
+ return HeaderList([cblas_h, lapacke_h])
+
+ @property
+ def build_directory(self):
+ return join_path(self.stage.source_path,
+ 'spack-build-shared' if self._building_shared
+ else 'spack-build-static')
+
+ def cmake_args(self):
+ args = ['-DBUILD_SHARED_LIBS:BOOL=' +
+ ('ON' if self._building_shared else 'OFF')]
+
+ if self.spec.satisfies('+lapacke'):
+ args.extend(['-DLAPACKE:BOOL=ON', '-DLAPACKE_WITH_TMG:BOOL=ON'])
+ else:
+ args.extend(['-DLAPACKE:BOOL=OFF', '-DLAPACKE_WITH_TMG:BOOL=OFF'])
+
+ if self.spec.satisfies('@3.6.0:'):
+ args.append('-DCBLAS=ON') # always build CBLAS
+
+ if self.spec.satisfies('%intel'):
+ # Intel compiler finds serious syntax issues when trying to
+ # build CBLAS and LapackE
+ args.extend(['-DCBLAS=OFF', '-DLAPACKE:BOOL=OFF'])
+
+ if self.spec.satisfies('%xl') or self.spec.satisfies('%xl_r'):
+ # use F77 compiler if IBM XL
+ args.extend(['-DCMAKE_Fortran_COMPILER=' + self.compiler.f77,
+ '-DCMAKE_Fortran_FLAGS=' +
+ (' '.join(self.spec.compiler_flags['fflags'])) +
+ " -O3 -qnohot"])
+
+ # deprecated routines are commonly needed by, for example, suitesparse
+ # Note that OpenBLAS spack is built with deprecated routines
+ args.append('-DBUILD_DEPRECATED:BOOL=ON')
+
+ if self.spec.satisfies('+external-blas'):
+ args.extend(['-DUSE_OPTIMIZED_BLAS:BOOL=ON',
+ '-DBLAS_LIBRARIES:PATH=' +
+ self.spec['blas'].libs.joined(';')])
+
+ if self.spec.satisfies('+xblas'):
+ args.extend(['-DXBLAS_INCLUDE_DIR=' +
+ self.spec['netlib-xblas'].prefix.include,
+ '-DXBLAS_LIBRARY=' +
+ self.spec['netlib-xblas'].libs.joined(';')])
+
+ args.append('-DBUILD_TESTING:BOOL=' +
+ ('ON' if self.run_tests else 'OFF'))
+
+ return args
+
+ # Build, install, and check both static and shared versions of the
+ # libraries when +shared
+ @when('+shared')
+ def cmake(self, spec, prefix):
+ for self._building_shared in (False, True):
+ super(NetlibLapack, self).cmake(spec, prefix)
+
+ @when('+shared')
+ def build(self, spec, prefix):
+ for self._building_shared in (False, True):
+ super(NetlibLapack, self).build(spec, prefix)
+
+ @when('+shared')
+ def install(self, spec, prefix):
+ for self._building_shared in (False, True):
+ super(NetlibLapack, self).install(spec, prefix)
+
+ @when('+shared')
+ def check(self):
+ for self._building_shared in (False, True):
+ super(NetlibLapack, self).check()
diff --git a/var/spack/repos/tutorial/packages/netlib-lapack/testing.patch b/var/spack/repos/tutorial/packages/netlib-lapack/testing.patch
new file mode 100644
index 0000000000..fce18548c4
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/netlib-lapack/testing.patch
@@ -0,0 +1,13 @@
+diff --git a/TESTING/LIN/alahd.f b/TESTING/LIN/alahd.f
+index 8f4cd58d..6a4946e0 100644
+--- a/TESTING/LIN/alahd.f
++++ b/TESTING/LIN/alahd.f
+@@ -1036,7 +1036,7 @@
+ 9929 FORMAT( ' Test ratios (1-3: ', A1, 'TZRZF):' )
+ 9920 FORMAT( 3X, ' 7-10: same as 3-6', 3X, ' 11-14: same as 3-6' )
+ 9921 FORMAT( ' Test ratios:', / ' (1-2: ', A1, 'GELS, 3-6: ', A1,
+- $ 'GELSY, 7-10: ', A1, 'GELSS, 11-14: ', A1, 'GELSD, 15-16: '
++ $ 'GELSY, 7-10: ', A1, 'GELSS, 11-14: ', A1, 'GELSD, 15-16: ',
+ $ A1, 'GETSLS)')
+ 9928 FORMAT( 7X, 'where ALPHA = ( 1 + SQRT( 17 ) ) / 8' )
+ 9927 FORMAT( 3X, I2, ': ABS( Largest element in L )', / 12X,
diff --git a/var/spack/repos/tutorial/packages/netlib-lapack/undefined_declarations.patch b/var/spack/repos/tutorial/packages/netlib-lapack/undefined_declarations.patch
new file mode 100644
index 0000000000..9dac2562f7
--- /dev/null
+++ b/var/spack/repos/tutorial/packages/netlib-lapack/undefined_declarations.patch
@@ -0,0 +1,26 @@
+diff --git a/SRC/dsytrf_aa_2stage.f b/SRC/dsytrf_aa_2stage.f
+index 2991305..f5f06cc 100644
+--- a/SRC/dsytrf_aa_2stage.f
++++ b/SRC/dsytrf_aa_2stage.f
+@@ -191,7 +191,7 @@
+ EXTERNAL LSAME, ILAENV
+ * ..
+ * .. External Subroutines ..
+- EXTERNAL XERBLA, DCOPY, DLACGV, DLACPY,
++ EXTERNAL XERBLA, DCOPY, DLACPY,
+ $ DLASET, DGBTRF, DGEMM, DGETRF,
+ $ DSYGST, DSWAP, DTRSM
+ * ..
+diff --git a/SRC/ssytrf_aa_2stage.f b/SRC/ssytrf_aa_2stage.f
+index be6809d..a929749 100644
+--- a/SRC/ssytrf_aa_2stage.f
++++ b/SRC/ssytrf_aa_2stage.f
+@@ -191,7 +191,7 @@
+ EXTERNAL LSAME, ILAENV
+ * ..
+ * .. External Subroutines ..
+- EXTERNAL XERBLA, SCOPY, SLACGV, SLACPY,
++ EXTERNAL XERBLA, SCOPY, SLACPY,
+ $ SLASET, SGBTRF, SGEMM, SGETRF,
+ $ SSYGST, SSWAP, STRSM
+ * ..
diff --git a/var/spack/repos/tutorial/repo.yaml b/var/spack/repos/tutorial/repo.yaml
new file mode 100644
index 0000000000..b43f511136
--- /dev/null
+++ b/var/spack/repos/tutorial/repo.yaml
@@ -0,0 +1,2 @@
+repo:
+ namespace: tutorial
--
cgit v1.2.3-70-g09d2