From 7e1f96c0aa155d4cf3eb9f869c47e1b707b51485 Mon Sep 17 00:00:00 2001 From: Levi Baber Date: Mon, 19 Nov 2018 20:39:42 -0600 Subject: r-paleotree: new package (#9895) --- .../repos/builtin/packages/r-paleotree/package.py | 24 ++++++++++++++++++++++ 1 file changed, 24 insertions(+) create mode 100644 var/spack/repos/builtin/packages/r-paleotree/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/r-paleotree/package.py b/var/spack/repos/builtin/packages/r-paleotree/package.py new file mode 100644 index 0000000000..ac043fada8 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-paleotree/package.py @@ -0,0 +1,24 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + + +from spack import * + + +class RPaleotree(RPackage): + """Provides tools for transforming, a posteriori + time-scaling, and modifying phylogenies containing + extinct (i.e. fossil) lineages""" + + homepage = "https://github.com/dwbapst/paleotree" + url = "https://cran.r-project.org/src/contrib/paleotree_3.1.3.tar.gz" + list_url = "https://cran.r-project.org/src/contrib/Archive/paleotree" + + version('3.1.3', sha256='4c1cc8a5e171cbbbd88f78914f86d5e6d144ae573816fbeeff2ab54a814ec614') + + depends_on('r@3.0.0:', type=('build', 'run')) + depends_on('r-ape@4.1:', type=('build', 'run')) + depends_on('r-phangorn@2.0.0:', type=('build', 'run')) + depends_on('r-phytools@0.6-00:', type=('build', 'run')) -- cgit v1.2.3-70-g09d2