From 838bba70c6aca5a30c77924781962c1c244eaa41 Mon Sep 17 00:00:00 2001 From: Desmond Orton Date: Tue, 6 Apr 2021 13:37:32 -0600 Subject: salmon: New patch (#22686) --- var/spack/repos/builtin/packages/salmon/package.py | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/salmon/package.py b/var/spack/repos/builtin/packages/salmon/package.py index 53eba05625..bdbc4aca9d 100644 --- a/var/spack/repos/builtin/packages/salmon/package.py +++ b/var/spack/repos/builtin/packages/salmon/package.py @@ -23,7 +23,7 @@ class Salmon(CMakePackage): depends_on('tbb') depends_on('boost@:1.66.0', when='@:0.14.1') - depends_on('boost@1.72.0', when='@1.4.0') + depends_on('boost@1.72.0:', when='@1.4.0:') depends_on('cereal') depends_on('jemalloc') depends_on('xz') @@ -76,6 +76,11 @@ class Salmon(CMakePackage): 'scripts/fetchPufferfish.sh') symlink('./salmon-v{0}.zip'.format(self.version), './external/pufferfish.zip') + # Fix issues related to lto-wrapper during install + filter_file('INTERPROCEDURAL_OPTIMIZATION True', + 'INTERPROCEDURAL_OPTIMIZATION False', + 'src/CMakeLists.txt', string=True) + filter_file('curl -k.*', '', 'scripts/fetchPufferfish.sh') def cmake_args(self): args = [ -- cgit v1.2.3-70-g09d2