From 8e1a7eaafa886fe6a416ce26a915724118cf4274 Mon Sep 17 00:00:00 2001 From: Eric Date: Mon, 23 Apr 2018 16:51:42 -0500 Subject: ARAGORN: Create new package (#7875) --- .../repos/builtin/packages/aragorn/package.py | 46 ++++++++++++++++++++++ 1 file changed, 46 insertions(+) create mode 100644 var/spack/repos/builtin/packages/aragorn/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/aragorn/package.py b/var/spack/repos/builtin/packages/aragorn/package.py new file mode 100644 index 0000000000..d9e992db26 --- /dev/null +++ b/var/spack/repos/builtin/packages/aragorn/package.py @@ -0,0 +1,46 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/spack/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Aragorn(Package): + """ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide + sequences.""" + + homepage = "http://mbio-serv2.mbioekol.lu.se/ARAGORN" + url = "http://mbio-serv2.mbioekol.lu.se/ARAGORN/Downloads/aragorn1.2.38.tgz" + + version('1.2.38', '1df0ed600069e6f520e5cd989de1eaf0') + + phases = ['build', 'install'] + + def build(self, spec, prefix): + cc = Executable(spack_cc) + cc('-O3', '-ffast-math', '-finline-functions', + '-oaragorn', 'aragorn' + format(spec.version.dotted) + '.c') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('aragorn', prefix.bin) -- cgit v1.2.3-60-g2f50