From 8e6d7f117aa1e5f2e53bd2598a35a327d83b2cea Mon Sep 17 00:00:00 2001 From: George Hartzell Date: Sat, 15 Jul 2017 09:06:43 -0700 Subject: Add package for MuSE (#4779) --- var/spack/repos/builtin/packages/muse/package.py | 38 ++++++++++++++++++++++++ 1 file changed, 38 insertions(+) create mode 100644 var/spack/repos/builtin/packages/muse/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/muse/package.py b/var/spack/repos/builtin/packages/muse/package.py new file mode 100644 index 0000000000..54dcdf9d15 --- /dev/null +++ b/var/spack/repos/builtin/packages/muse/package.py @@ -0,0 +1,38 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Muse(MakefilePackage): + """Somatic point mutation caller.""" + + homepage = "http://bioinformatics.mdanderson.org/main/MuSE" + url = "https://github.com/danielfan/MuSE/archive/v1.0-rc.tar.gz" + + version('1.0-rc', 'c63fdb48c041f6f9545879f1a7e4da58') + + def install(self, spec, prefix): + mkdir(prefix.bin) + install('MuSE', prefix.bin.MuSE) -- cgit v1.2.3-70-g09d2