From 998dc7a121088ceed237958942c23b8bfc8cd5e2 Mon Sep 17 00:00:00 2001
From: Justin S <3630356+codeandkey@users.noreply.github.com>
Date: Tue, 7 Apr 2020 20:41:18 -0500
Subject: py-cyvcf2: new package at 0.11.7 (#15908)

* py-cyvcf2: new package at 0.11.7

* py-cyvcf2: update dependencies
---
 .../repos/builtin/packages/py-cyvcf2/package.py    | 25 ++++++++++++++++++++++
 1 file changed, 25 insertions(+)
 create mode 100644 var/spack/repos/builtin/packages/py-cyvcf2/package.py

(limited to 'var')

diff --git a/var/spack/repos/builtin/packages/py-cyvcf2/package.py b/var/spack/repos/builtin/packages/py-cyvcf2/package.py
new file mode 100644
index 0000000000..153d00fe29
--- /dev/null
+++ b/var/spack/repos/builtin/packages/py-cyvcf2/package.py
@@ -0,0 +1,25 @@
+# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class PyCyvcf2(PythonPackage):
+    """fast vcf parsing with cython + htslib"""
+
+    homepage = "https://github.com/brentp/cyvcf2"
+    url      = "https://pypi.io/packages/source/c/cyvcf2/cyvcf2-0.11.7.tar.gz"
+
+    version('0.11.7', sha256='a4b6229b89a0a1043684c65cbdd702c366a8800dc3591fb44c4b5a08640cbeec')
+
+    depends_on('python@2.7:', type=('build', 'run'))
+    depends_on('py-setuptools', type='build')
+
+    depends_on('py-cython@0.23.3:', type='build')
+    depends_on('py-numpy', type=('build', 'run'))
+    depends_on('py-coloredlogs', type=('build', 'run'))
+    depends_on('py-click', type=('build', 'run'))
+
+    depends_on('curl')
-- 
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