From a32671382615bbb186d3e0e0e7f891bac481d371 Mon Sep 17 00:00:00 2001 From: Harmen Stoppels Date: Tue, 21 Sep 2021 13:10:16 +0200 Subject: py-abcpy: new package (#25713) --- .../repos/builtin/packages/py-abcpy/package.py | 38 ++++++++++++++++++++++ 1 file changed, 38 insertions(+) create mode 100644 var/spack/repos/builtin/packages/py-abcpy/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/py-abcpy/package.py b/var/spack/repos/builtin/packages/py-abcpy/package.py new file mode 100644 index 0000000000..5ed72a3883 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-abcpy/package.py @@ -0,0 +1,38 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyAbcpy(PythonPackage): + """ + ABCpy is a highly modular, scientific library for approximate Bayesian + computation (ABC) written in Python. It is designed to run all included ABC + algorithms in parallel, either using multiple cores of a single computer or + using an Apache Spark or MPI enabled cluster. + """ + + homepage = "https://github.com/eth-cscs/abcpy" + pypi = "abcpy/abcpy-0.6.3.tar.gz" + + version('0.6.3', sha256='14cd959f3ccff8f5fd1d16239b8706cc8d1c1e2fe25d72855f500f005de41245') + + depends_on('python@3.6:', type=('build', 'run')) + depends_on('py-setuptools', type='build') + + depends_on('py-numpy', type=('build', 'run')) + depends_on('py-scipy', type=('build', 'run')) + depends_on('py-scikit-learn@0.23.1:', type=('build', 'run')) + depends_on('py-glmnet@2.2.1:', type=('build', 'run')) + depends_on('py-mpi4py', type=('build', 'run')) + depends_on('py-cloudpickle', type=('build', 'run')) + depends_on('py-matplotlib', type=('build', 'run')) + depends_on('py-tqdm', type=('build', 'run')) + depends_on('py-pot', type=('build', 'run')) + + # Development dependencies are required in setup.py :( + depends_on('py-sphinx', type='build') + depends_on('py-sphinx-rtd-theme', type='build') + depends_on('py-coverage', type='build') -- cgit v1.2.3-70-g09d2