From b2cc36109f8a0db954349427a3a79c191010797a Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Mon, 16 Jan 2023 19:55:06 -0600 Subject: stringtie: add version 2.2.1 and fix build (#34973) - stringtie uses internal samtools so remove dependency on samtools - add dependency for zlib - use make release target to get correct flags --- var/spack/repos/builtin/packages/stringtie/package.py | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/stringtie/package.py b/var/spack/repos/builtin/packages/stringtie/package.py index db954d05a5..df476b30a9 100644 --- a/var/spack/repos/builtin/packages/stringtie/package.py +++ b/var/spack/repos/builtin/packages/stringtie/package.py @@ -13,11 +13,15 @@ class Stringtie(MakefilePackage): homepage = "https://ccb.jhu.edu/software/stringtie" url = "https://github.com/gpertea/stringtie/archive/v1.3.3b.tar.gz" + version("2.2.1", sha256="19592aa37e293f4dcd684a4c6e0a1439ee34876d9f22944fb4edceba8c09631b") version("1.3.4d", sha256="0134c0adc264efd31a1df4301b33bfcf3b3fe96bd3990ce3df90819bad9af968") version("1.3.4a", sha256="6164a5fa9bf8807ef68ec89f47e3a61fe57fa07fe858f52fb6627f705bf71add") version("1.3.3b", sha256="30e8a3a29b474f0abeef1540d9b4624a827d8b29d7347226d86a38afea28bc0f") - depends_on("samtools") + depends_on("zlib") + + def build(self, spec, prefix): + make("release") def install(self, spec, prefix): mkdirp(prefix.bin) -- cgit v1.2.3-60-g2f50