From b4ab4ddc2742d52baa768db2f7a1769f594c5224 Mon Sep 17 00:00:00 2001 From: Glenn Johnson Date: Mon, 21 Mar 2022 09:18:19 -0500 Subject: augustus: explicitly depend on ncurses (#29597) --- var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch | 2 +- var/spack/repos/builtin/packages/augustus/package.py | 1 + 2 files changed, 2 insertions(+), 1 deletion(-) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch b/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch index bbd5bfeef6..45dce94cc3 100644 --- a/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch +++ b/var/spack/repos/builtin/packages/augustus/bam2wig_Makefile.patch @@ -17,7 +17,7 @@ - HTSERRHINT:=$(HTSERRHINT)"Check if HTSlib is installed and of version 1.10 or higher - see README.txt" -endif +INCLUDES=-I$(HTSLIBDIR)/include/htslib -+HTSLIBS=-L$(HTSLIBDIR)/lib -Wl,-rpath,$(HTSLIBDIR)/lib -lhts -lcurses -lm -lz -lpthread -lcurl -lssl -lcrypto -lbz2 -llzma ++HTSLIBS=-L$(HTSLIBDIR)/lib -Wl,-rpath,$(HTSLIBDIR)/lib -lhts -lncurses -lm -lz -lpthread -lcurl -lssl -lcrypto -lbz2 -llzma CFLAGS:=-Wall -O2 $(CFLAGS) CC?=gcc diff --git a/var/spack/repos/builtin/packages/augustus/package.py b/var/spack/repos/builtin/packages/augustus/package.py index c5bcd71f18..b158c5b346 100644 --- a/var/spack/repos/builtin/packages/augustus/package.py +++ b/var/spack/repos/builtin/packages/augustus/package.py @@ -39,6 +39,7 @@ class Augustus(MakefilePackage): depends_on('htslib') depends_on('bcftools') depends_on('samtools') + depends_on('ncurses') depends_on('curl', when='@3.3.1:') depends_on('sqlite', when='@3.4.0:') depends_on('mysql-client', when='@3.4.0:') -- cgit v1.2.3-60-g2f50