From c3d0911cf65fd9dfa3d816e92022d3680f5afb68 Mon Sep 17 00:00:00 2001 From: Audrey Thoma Date: Thu, 6 Jul 2017 10:10:25 -0500 Subject: cdbfasta: new package (#4681) --- .../repos/builtin/packages/cdbfasta/package.py | 39 ++++++++++++++++++++++ 1 file changed, 39 insertions(+) create mode 100644 var/spack/repos/builtin/packages/cdbfasta/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/cdbfasta/package.py b/var/spack/repos/builtin/packages/cdbfasta/package.py new file mode 100644 index 0000000000..9fa0c62442 --- /dev/null +++ b/var/spack/repos/builtin/packages/cdbfasta/package.py @@ -0,0 +1,39 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Cdbfasta(MakefilePackage): + """Fast indexing and retrieval of fasta records from flat file databases""" + + homepage = "https://github.com/gpertea/cdbfasta" + url = "https://github.com/gpertea/cdbfasta" + + version('2017-03-16', git='https://github.com/gpertea/cdbfasta.git', commit='b3e481fe02dfbc767a3842bcb1b687c60376a5e8') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('cdbfasta', prefix.bin) + install('cdbyank', prefix.bin) -- cgit v1.2.3-70-g09d2