From d5327d8d4bfa0fd1094dacbdc07a83ed41e4a50e Mon Sep 17 00:00:00 2001 From: sknigh Date: Tue, 6 Nov 2018 00:12:48 -0800 Subject: Add OpenMPI 3.1.3 and a bug patch (#9680) --- .../repos/builtin/packages/openmpi/btl_vader.patch | 24 ++++++++++++++++++++++ .../repos/builtin/packages/openmpi/package.py | 9 ++++++++ 2 files changed, 33 insertions(+) create mode 100644 var/spack/repos/builtin/packages/openmpi/btl_vader.patch (limited to 'var') diff --git a/var/spack/repos/builtin/packages/openmpi/btl_vader.patch b/var/spack/repos/builtin/packages/openmpi/btl_vader.patch new file mode 100644 index 0000000000..005537d732 --- /dev/null +++ b/var/spack/repos/builtin/packages/openmpi/btl_vader.patch @@ -0,0 +1,24 @@ +diff --git a/opal/mca/btl/vader/btl_vader_fbox.h b/opal/mca/btl/vader/btl_vader_fbox.h +index 17239ce8ef..ee5c913551 100644 +--- a/opal/mca/btl/vader/btl_vader_fbox.h ++++ b/opal/mca/btl/vader/btl_vader_fbox.h +@@ -138,9 +138,6 @@ static inline bool mca_btl_vader_fbox_sendi (mca_btl_base_endpoint_t *ep, unsign + memcpy (data + header_size, payload, payload_size); + } + +- /* write out part of the header now. the tag will be written when the data is available */ +- mca_btl_vader_fbox_set_header (MCA_BTL_VADER_FBOX_HDR(dst), tag, ep->fbox_out.seq++, data_size); +- + end += size; + + if (OPAL_UNLIKELY(fbox_size == end)) { +@@ -152,6 +149,9 @@ static inline bool mca_btl_vader_fbox_sendi (mca_btl_base_endpoint_t *ep, unsign + MCA_BTL_VADER_FBOX_HDR(ep->fbox_out.buffer + end)->ival = 0; + } + ++ /* write out part of the header now. the tag will be written when the data is available */ ++ mca_btl_vader_fbox_set_header (MCA_BTL_VADER_FBOX_HDR(dst), tag, ep->fbox_out.seq++, data_size); ++ + /* align the buffer */ + ep->fbox_out.end = ((uint32_t) hbs << 31) | end; + opal_atomic_wmb (); diff --git a/var/spack/repos/builtin/packages/openmpi/package.py b/var/spack/repos/builtin/packages/openmpi/package.py index 0367c887a6..40ac79a2e8 100644 --- a/var/spack/repos/builtin/packages/openmpi/package.py +++ b/var/spack/repos/builtin/packages/openmpi/package.py @@ -64,6 +64,7 @@ class Openmpi(AutotoolsPackage): list_url = "http://www.open-mpi.org/software/ompi/" # Current + version('3.1.3', sha256='8be04307c00f51401d3fb9d837321781ea7c79f2a5a4a2e5d4eaedc874087ab6') version('3.1.2', '210df69fafd964158527e7f37e333239') # libmpi.so.40.10.2 version('3.1.1', '493f1db2f75afaab1c8ecba78d2f5aab') # libmpi.so.40.10.1 version('3.1.0', '0895e268ca27735d7654bf64cee6c256') # libmpi.so.40.10.0 @@ -166,6 +167,14 @@ class Openmpi(AutotoolsPackage): patch('configure.patch', when="@1.10.1") patch('fix_multidef_pmi_class.patch', when="@2.0.0:2.0.1") + # Vader Bug: https://github.com/open-mpi/ompi/issues/5375 + # Haven't release fix for 2.1.x + patch('btl_vader.patch', when='@2.1.3:2.1.5') + + # Fixed in 3.0.3 and 3.1.3 + patch('btl_vader.patch', when='@3.0.1:3.0.2') + patch('btl_vader.patch', when='@3.1.0:3.1.2') + fabrics = ('psm', 'psm2', 'verbs', 'mxm', 'ucx', 'libfabric') variant( -- cgit v1.2.3-70-g09d2