From d68aa0386830dd000d831f7b3f147776860ab806 Mon Sep 17 00:00:00 2001 From: Audrey Thoma Date: Thu, 13 Jul 2017 09:21:37 -0500 Subject: graphmap: new package (#4707) --- .../repos/builtin/packages/graphmap/package.py | 43 ++++++++++++++++++++++ 1 file changed, 43 insertions(+) create mode 100644 var/spack/repos/builtin/packages/graphmap/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/graphmap/package.py b/var/spack/repos/builtin/packages/graphmap/package.py new file mode 100644 index 0000000000..954fc7622a --- /dev/null +++ b/var/spack/repos/builtin/packages/graphmap/package.py @@ -0,0 +1,43 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Graphmap(MakefilePackage): + """A highly sensitive and accurate mapper for long, error-prone reads""" + + homepage = "https://github.com/isovic/graphmap" + url = "https://github.com/isovic/graphmap/archive/v0.3.0.tar.gz" + + version('0.3.0', git='https://github.com/isovic/graphmap.git', commit='eb8c75d68b03be95464318afa69b645a59f8f6b7') + + def edit(self, spec, prefix): + mkdirp(prefix.bin) + makefile = FileFilter('Makefile') + makefile.filter('/usr/bin/graphmap', prefix.bin.graphmap) + + def build(self, spec, prefix): + make('modules') + make() -- cgit v1.2.3-70-g09d2