From ddaba07d8297544f2587f0c31fcbd2dafa824eb3 Mon Sep 17 00:00:00 2001 From: Geoffrey Oxberry Date: Tue, 5 Apr 2016 19:00:28 -0700 Subject: metis 4.0.3 Add version 4.0.3 to metis package. Attempted to implement reasonable versions of all variants declared for metis@5.1.0; some of these do not have analogues in metis@4.0.3, and errors are raised accordingly. Also updated dependencies of packages with depends_on('metis') to depends_on('metis@5:') to ensure that these packages still build. --- var/spack/repos/builtin/packages/dealii/package.py | 2 +- var/spack/repos/builtin/packages/eigen/package.py | 2 +- var/spack/repos/builtin/packages/metis/package.py | 83 ++++++++++++++++++++-- var/spack/repos/builtin/packages/mumps/package.py | 2 +- .../repos/builtin/packages/parmetis/package.py | 2 +- var/spack/repos/builtin/packages/petsc/package.py | 2 +- .../repos/builtin/packages/superlu-dist/package.py | 2 +- .../repos/builtin/packages/trilinos/package.py | 2 +- 8 files changed, 86 insertions(+), 11 deletions(-) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/dealii/package.py b/var/spack/repos/builtin/packages/dealii/package.py index 1f763ad358..b251d50ca1 100644 --- a/var/spack/repos/builtin/packages/dealii/package.py +++ b/var/spack/repos/builtin/packages/dealii/package.py @@ -40,7 +40,7 @@ class Dealii(Package): depends_on ("arpack-ng+mpi", when='+arpack+mpi') depends_on ("doxygen", when='+doc') depends_on ("hdf5+mpi~cxx", when='+hdf5+mpi') #FIXME NetCDF declares dependency with ~cxx, why? - depends_on ("metis", when='+metis') + depends_on ("metis@5:", when='+metis') depends_on ("netcdf+mpi", when="+netcdf+mpi") depends_on ("netcdf-cxx", when='+netcdf+mpi') depends_on ("oce", when='+oce') diff --git a/var/spack/repos/builtin/packages/eigen/package.py b/var/spack/repos/builtin/packages/eigen/package.py index 8d6e672f86..1501989812 100644 --- a/var/spack/repos/builtin/packages/eigen/package.py +++ b/var/spack/repos/builtin/packages/eigen/package.py @@ -45,7 +45,7 @@ class Eigen(Package): # TODO : dependency on googlehash, superlu, adolc missing - depends_on('metis', when='+metis') + depends_on('metis@5:', when='+metis') depends_on('scotch', when='+scotch') depends_on('fftw', when='+fftw') depends_on('suite-sparse', when='+suitesparse') diff --git a/var/spack/repos/builtin/packages/metis/package.py b/var/spack/repos/builtin/packages/metis/package.py index d3bab554fe..e348eca4ba 100644 --- a/var/spack/repos/builtin/packages/metis/package.py +++ b/var/spack/repos/builtin/packages/metis/package.py @@ -24,7 +24,7 @@ ############################################################################## from spack import * -import glob,sys +import glob, sys, os class Metis(Package): """ @@ -37,6 +37,8 @@ class Metis(Package): url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz" version('5.1.0', '5465e67079419a69e0116de24fce58fe') + version('4.0.3', '5efa35de80703c1b2c4d0de080fafbcf4e0d363a21149a1ad2f96e0144841a55', + url='http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/OLD/metis-4.0.3.tar.gz') variant('shared', default=True, description='Enables the build of shared libraries') variant('debug', default=False, description='Builds the library in debug mode') @@ -45,12 +47,85 @@ class Metis(Package): variant('idx64', default=False, description='Use int64_t as default index type') variant('double', default=False, description='Use double precision floating point types') - depends_on('cmake @2.8:') # build-time dependency - + depends_on('cmake @2.8:', when='@5:') # build-time dependency depends_on('gdb', when='+gdb') - patch('install_gklib_defs_rename.patch') + patch('install_gklib_defs_rename.patch', when='@5:') + + + @when('@4:4.0.3') + def install(self, spec, prefix): + if '+gdb' in spec: + raise InstallError('gdb support not implemented in METIS 4!') + if '+idx64' in spec: + raise InstallError('idx64 option not implemented in METIS 4!') + if '+double' in spec: + raise InstallError('double option not implemented for METIS 4!') + + options = ['COPTIONS=-fPIC'] + if '+debug' in spec: + options.append('OPTFLAGS=-g -O0') + make(*options) + + mkdir(prefix.bin) + for x in ('pmetis', 'kmetis', 'oemetis', 'onmetis', 'partnmesh', + 'partdmesh', 'mesh2nodal', 'mesh2dual', 'graphchk'): + install(x, prefix.bin) + + mkdir(prefix.lib) + install('libmetis.a', prefix.lib) + + mkdir(prefix.include) + for h in glob.glob(join_path('Lib', '*.h')): + install(h, prefix.include) + + mkdir(prefix.share) + for f in (join_path(*p) + for p in (('Programs', 'io.c'), + ('Test','mtest.c'), + ('Graphs','4elt.graph'), + ('Graphs', 'metis.mesh'), + ('Graphs', 'test.mgraph'))): + install(f, prefix.share) + + if '+shared' in spec: + if sys.platform == 'darwin': + lib_dsuffix = 'dylib' + load_flag = '-Wl,-all_load' + no_load_flag = '' + else: + lib_dsuffix = 'so' + load_flag = '-Wl,-whole-archive' + no_load_flag = '-Wl,-no-whole-archive' + + os.system(spack_cc + ' -fPIC -shared ' + load_flag + + ' libmetis.a ' + no_load_flag + ' -o libmetis.' + + lib_dsuffix) + install('libmetis.' + lib_dsuffix, prefix.lib) + + # Set up and run tests on installation + symlink(join_path(prefix.share, 'io.c'), 'io.c') + symlink(join_path(prefix.share, 'mtest.c'), 'mtest.c') + os.system(spack_cc + ' -I%s' % prefix.include + ' -c io.c') + os.system(spack_cc + ' -I%s' % prefix.include + + ' -L%s' % prefix.lib + ' -lmetis mtest.c io.o -o mtest') + _4eltgraph = join_path(prefix.share, '4elt.graph') + test_mgraph = join_path(prefix.share, 'test.mgraph') + metis_mesh = join_path(prefix.share, 'metis.mesh') + kmetis = join_path(prefix.bin, 'kmetis') + os.system('./mtest ' + _4eltgraph) + os.system(kmetis + ' ' + _4eltgraph + ' 40') + os.system(join_path(prefix.bin, 'onmetis') + ' ' + _4eltgraph) + os.system(join_path(prefix.bin, 'pmetis') + ' ' + test_mgraph + ' 2') + os.system(kmetis + ' ' + test_mgraph + ' 2') + os.system(kmetis + ' ' + test_mgraph + ' 5') + os.system(join_path(prefix.bin, 'partnmesh') + metis_mesh + ' 10') + os.system(join_path(prefix.bin, 'partdmesh') + metis_mesh + ' 10') + os.system(join_path(prefix.bin, 'mesh2dual') + metis_mesh) + + + @when('@5:') def install(self, spec, prefix): options = [] diff --git a/var/spack/repos/builtin/packages/mumps/package.py b/var/spack/repos/builtin/packages/mumps/package.py index 025d86ebdc..58f790ec32 100644 --- a/var/spack/repos/builtin/packages/mumps/package.py +++ b/var/spack/repos/builtin/packages/mumps/package.py @@ -23,7 +23,7 @@ class Mumps(Package): depends_on('scotch + esmumps', when='~ptscotch+scotch') depends_on('scotch + esmumps + mpi', when='+ptscotch') - depends_on('metis', when='+metis') + depends_on('metis@5:', when='+metis') depends_on('parmetis', when="+parmetis") depends_on('blas') depends_on('lapack') diff --git a/var/spack/repos/builtin/packages/parmetis/package.py b/var/spack/repos/builtin/packages/parmetis/package.py index ff4370aa4b..b49f8dae00 100644 --- a/var/spack/repos/builtin/packages/parmetis/package.py +++ b/var/spack/repos/builtin/packages/parmetis/package.py @@ -44,7 +44,7 @@ class Parmetis(Package): depends_on('mpi') patch('enable_external_metis.patch') - depends_on('metis') + depends_on('metis@5:') # bug fixes from PETSc developers # https://bitbucket.org/petsc/pkg-parmetis/commits/1c1a9fd0f408dc4d42c57f5c3ee6ace411eb222b/raw/ diff --git a/var/spack/repos/builtin/packages/petsc/package.py b/var/spack/repos/builtin/packages/petsc/package.py index 5c1fc6cc92..1161dd7d67 100644 --- a/var/spack/repos/builtin/packages/petsc/package.py +++ b/var/spack/repos/builtin/packages/petsc/package.py @@ -40,7 +40,7 @@ class Petsc(Package): # Other dependencies depends_on('boost', when='+boost') - depends_on('metis', when='+metis') + depends_on('metis@5:', when='+metis') depends_on('hdf5+mpi', when='+hdf5+mpi') depends_on('parmetis', when='+metis+mpi') diff --git a/var/spack/repos/builtin/packages/superlu-dist/package.py b/var/spack/repos/builtin/packages/superlu-dist/package.py index ddcb7f9225..5cf5e129b4 100644 --- a/var/spack/repos/builtin/packages/superlu-dist/package.py +++ b/var/spack/repos/builtin/packages/superlu-dist/package.py @@ -15,7 +15,7 @@ class SuperluDist(Package): depends_on ('blas') depends_on ('lapack') depends_on ('parmetis') - depends_on ('metis') + depends_on ('metis@5:') def install(self, spec, prefix): makefile_inc = [] diff --git a/var/spack/repos/builtin/packages/trilinos/package.py b/var/spack/repos/builtin/packages/trilinos/package.py index 6223848c68..0f72055fa7 100644 --- a/var/spack/repos/builtin/packages/trilinos/package.py +++ b/var/spack/repos/builtin/packages/trilinos/package.py @@ -42,7 +42,7 @@ class Trilinos(Package): depends_on('matio') depends_on('glm') depends_on('swig') - depends_on('metis',when='+metis') + depends_on('metis@5:',when='+metis') depends_on('suite-sparse',when='+suite-sparse') # MPI related dependencies -- cgit v1.2.3-60-g2f50