From e1301df60c99cdc0e2f8a13fbbd269d3a01349e5 Mon Sep 17 00:00:00 2001 From: Zack Galbreath Date: Fri, 10 Mar 2023 16:32:11 -0500 Subject: ci: version bump for ghcr.io/spack/e4s-amazonlinux-2 (#35976) * ci: version bump for ghcr.io/spack/e4s-amazonlinux-2 This new image comes with GnuPG v2.4.0 * py-cython: upperbounds for Python versions * fix py-gevent nonsense --------- Co-authored-by: Harmen Stoppels --- var/spack/repos/builtin/packages/py-cython/package.py | 13 +++++++++++-- var/spack/repos/builtin/packages/py-gevent/package.py | 9 +++++++++ 2 files changed, 20 insertions(+), 2 deletions(-) (limited to 'var') diff --git a/var/spack/repos/builtin/packages/py-cython/package.py b/var/spack/repos/builtin/packages/py-cython/package.py index 0c27ef9c67..fcd264f95b 100644 --- a/var/spack/repos/builtin/packages/py-cython/package.py +++ b/var/spack/repos/builtin/packages/py-cython/package.py @@ -14,10 +14,11 @@ class PyCython(PythonPackage): version("3.0.0a9", sha256="23931c45877432097cef9de2db2dc66322cbc4fc3ebbb42c476bb2c768cecff0") version( - "0.29.32", - sha256="8733cf4758b79304f2a4e39ebfac5e92341bce47bcceb26c1254398b2f8c1af7", + "0.29.33", + sha256="5040764c4a4d2ce964a395da24f0d1ae58144995dab92c6b96f44c3f4d72286a", preferred=True, ) + version("0.29.32", sha256="8733cf4758b79304f2a4e39ebfac5e92341bce47bcceb26c1254398b2f8c1af7") version("0.29.30", sha256="2235b62da8fe6fa8b99422c8e583f2fb95e143867d337b5c75e4b9a1a865f9e3") version("0.29.24", sha256="cdf04d07c3600860e8c2ebaad4e8f52ac3feb212453c1764a49ac08c827e8443") version("0.29.23", sha256="6a0d31452f0245daacb14c979c77e093eb1a546c760816b5eed0047686baad8e") @@ -41,6 +42,14 @@ class PyCython(PythonPackage): depends_on("python@2.7:2,3.4:", when="@3:", type=("build", "link", "run")) depends_on("python@2.6:2,3.3:", type=("build", "link", "run")) + + # https://github.com/cython/cython/commit/1cd24026e9cf6d63d539b359f8ba5155fd48ae21 + # collections.Iterable was removed in Python 3.10 + depends_on("python@:3.9", when="@:0.29.14", type=("build", "link", "run")) + + # https://github.com/cython/cython/commit/430e2ca220c8fed49604daf578df98aadb33a87d + depends_on("python@:3.8", when="@:0.29.13", type=("build", "link", "run")) + depends_on("py-setuptools", type=("build", "run")) depends_on("gdb@7.2:", type="test") diff --git a/var/spack/repos/builtin/packages/py-gevent/package.py b/var/spack/repos/builtin/packages/py-gevent/package.py index 58642c160d..c5b59423fb 100644 --- a/var/spack/repos/builtin/packages/py-gevent/package.py +++ b/var/spack/repos/builtin/packages/py-gevent/package.py @@ -39,6 +39,15 @@ class PyGevent(PythonPackage): # Deprecated compiler options. upstream PR: https://github.com/gevent/gevent/pull/1896 patch("icc.patch", when="%intel") + @run_before("install") + def recythonize(self): + # Clean pre-generated cython files -- we've seen issues with Python 3.8 due to + # an old cython that was used to generate the C sources. + # On top of that, they specify a prerequisite on a file in cython's prefix, + # meaning that cython runs again depending on whether it was installed before e.g. + # 2020... So, just clean and re-run from scratch instead. + python("setup.py", "clean") + def flag_handler(self, name, flags): if name == "cflags": if self.spec.satisfies("%oneapi@2023:"): -- cgit v1.2.3-70-g09d2