From e62ddcb5823133ce20ff6c00084f71b3bde28992 Mon Sep 17 00:00:00 2001 From: iarspider Date: Mon, 6 Jul 2020 17:51:36 +0200 Subject: Add Rivet and YODA (#17372) * Add Rivet and YODA * Add patches * Flake-8 * Set level for Rivet patches * Syntax fix * Fix dependencies of Rivet * Update var/spack/repos/builtin/packages/rivet/package.py Co-authored-by: Adam J. Stewart Co-authored-by: Adam J. Stewart --- var/spack/repos/builtin/packages/rivet/package.py | 123 +++++++++++++++++++++ .../repos/builtin/packages/rivet/rivet-1.8.2.patch | 44 ++++++++ .../repos/builtin/packages/rivet/rivet-1.9.0.patch | 30 +++++ .../repos/builtin/packages/rivet/rivet-2.2.0.patch | 11 ++ .../repos/builtin/packages/rivet/rivet-2.2.1.patch | 11 ++ .../repos/builtin/packages/rivet/rivet-2.4.0.patch | 12 ++ .../repos/builtin/packages/rivet/rivet-2.4.2.patch | 39 +++++++ .../repos/builtin/packages/rivet/rivet-2.4.3.patch | 39 +++++++ .../repos/builtin/packages/rivet/rivet-2.5.1.patch | 39 +++++++ .../repos/builtin/packages/rivet/rivet-2.5.2.patch | 10 ++ .../repos/builtin/packages/rivet/rivet-2.5.3.patch | 43 +++++++ .../repos/builtin/packages/rivet/rivet-2.5.4.patch | 42 +++++++ .../repos/builtin/packages/rivet/rivet-2.6.0.patch | 90 +++++++++++++++ .../repos/builtin/packages/rivet/rivet-2.6.1.patch | 24 ++++ .../repos/builtin/packages/rivet/rivet-2.6.2.patch | 97 ++++++++++++++++ .../repos/builtin/packages/rivet/rivet-2.7.0.patch | 97 ++++++++++++++++ .../repos/builtin/packages/rivet/rivet-3.0.0.patch | 70 ++++++++++++ .../repos/builtin/packages/rivet/rivet-3.0.1.patch | 11 ++ .../repos/builtin/packages/rivet/rivet-3.1.0.patch | 11 ++ .../repos/builtin/packages/rivet/rivet-3.1.1.patch | 11 ++ var/spack/repos/builtin/packages/yoda/package.py | 84 ++++++++++++++ .../repos/builtin/packages/yoda/yoda-1.5.5.patch | 50 +++++++++ .../repos/builtin/packages/yoda/yoda-1.5.9.patch | 50 +++++++++ .../repos/builtin/packages/yoda/yoda-1.6.1.patch | 72 ++++++++++++ .../repos/builtin/packages/yoda/yoda-1.6.2.patch | 22 ++++ .../repos/builtin/packages/yoda/yoda-1.6.3.patch | 50 +++++++++ .../repos/builtin/packages/yoda/yoda-1.6.4.patch | 11 ++ .../repos/builtin/packages/yoda/yoda-1.6.5.patch | 23 ++++ .../repos/builtin/packages/yoda/yoda-1.6.6.patch | 11 ++ .../repos/builtin/packages/yoda/yoda-1.6.7.patch | 11 ++ 30 files changed, 1238 insertions(+) create mode 100644 var/spack/repos/builtin/packages/rivet/package.py create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-1.8.2.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-1.9.0.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.2.0.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.2.1.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.4.0.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.4.2.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.4.3.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.5.1.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.5.2.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.5.3.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.5.4.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.6.0.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.6.1.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.6.2.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-2.7.0.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-3.0.0.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-3.0.1.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-3.1.0.patch create mode 100644 var/spack/repos/builtin/packages/rivet/rivet-3.1.1.patch create mode 100644 var/spack/repos/builtin/packages/yoda/package.py create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.5.5.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.5.9.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.6.1.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.6.2.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.6.3.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.6.4.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.6.5.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.6.6.patch create mode 100644 var/spack/repos/builtin/packages/yoda/yoda-1.6.7.patch (limited to 'var') diff --git a/var/spack/repos/builtin/packages/rivet/package.py b/var/spack/repos/builtin/packages/rivet/package.py new file mode 100644 index 0000000000..8baf2c42ec --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/package.py @@ -0,0 +1,123 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Rivet(AutotoolsPackage): + """Rivet - the particle-physics MC analysis toolkit""" + + homepage = "https://rivet.hepforge.org/" + url = "https://rivet.hepforge.org/downloads/?f=Rivet-3.1.2.tar.bz2" + + version('3.1.2', sha256='c041d09644f4eae7c212d82237033267fbc1583dfbb4e3e67377f86cece9577a') + version('3.1.1', sha256='7c98b26af5f859bc65200499d15765e4b056b4cf233b34176f27a7e6bc4cf9b1') + version('3.1.0', sha256='4e156daee5eb10bd1573ef32d4a6a6df74788cd9180fc977db93ef4cb281000c') + version('3.0.2', sha256='9624d6cdcad77eafde40312cf6a1c97f4263f22faf9244b198c140b2c256d2f3') + version('3.0.1', sha256='e7551168b86a05c9c029c319c313a0aa142a476195e7ff986c896c1b868f89dd') + version('3.0.0', sha256='3944434d3791dccb54f7b2257589df6252cc7c065ce9deb57fbef466ff9e62b1') + version('2.7.2b', sha256='e9f0a709f8226cde54f9406d36efab1e1b8ed0c6574fbcb1d72a186b09188106') + version('2.7.2', sha256='a6634537c005660e56514b70ab9efb9d466c50685d6fb45ed03e9e1988479f02') + version('2.7.1', sha256='b4145d8369b8a9fa0ada7ba2e5a2e9992d8e4a12ca4874d835246d2e708cbdef') + version('2.7.0', sha256='34ad6a0b47dc4736feac8580a275e8b3a46df8fbeefd91e813add0a1525aacaf') + version('2.6.2', sha256='9dde49d5c02038a295f03d2972f85be8746205bdb5ca1eab868b2c9129ade37a') + version('2.6.1', sha256='e490d1f35aafa3e175690ae92f862c07a5fe2c51f693c88c87789f0441c89022') + version('2.6.0', sha256='fb3229dccd31ea40b0af09974253073f6ad0a3a97e9a0cf44b53748ea8e2f900') + version('2.5.4', sha256='772252193698d994fd111f790e72a4024df7572d492e3d5a9e840a074c5527e2') + version('2.5.3', sha256='99e10330564ac479c6637d317c08882889a272db8ee204ad45a6ee1dcb291de4') + version('2.5.2', sha256='70aa27764a14159c94c0b753a0c3d3600ac669def398cb2d8a6c63ae17704f05') + version('2.5.1', sha256='14ee5828de217e96a30e666192515a2083afee030d81d36fc6bea948e9f7810a') + version('2.5.0', sha256='c59ff35715be0caf65d6ba808b3badad0f6f7e7758f2049fb6ba43ed579bd4af') + version('2.4.3', sha256='18aafecab6c3baeac871a9743946433c2dc01825d8fe291b157719a15c342682') + version('2.4.2', sha256='accb146f3082719781a51eec879427c31401577c44f60b27ec8450102fe68aff') + version('2.4.1', sha256='c14f0f58d1792d84d62c62b44ebb94db004776feba83fd8186bba898d55123cf') + version('2.4.0', sha256='5ee2f34a277ed058b8aef750d946b40d4cf781023b9adab03ca95e803a39fb06') + version('2.3.0', sha256='dd07702981d586e4b97b0fa56ae08cd08a631a952322a9b52e7622a46a7741ab') + version('2.2.1', sha256='9e64ba19d567bdf4d0cc42b435491c4363b5fec90170d034445a99a1e752b691') + version('2.2.0', sha256='3bdafe2007ff54c4734e0c8bc6ba9dc97028d4c41d538201b9582a869af8ae1a') + version('2.1.2', sha256='40a20c1ee186326e5bfd906e0bc88f16dc740551be9cc274e9a826873d9c1eed') + version('2.1.1', sha256='eefa936de6f6c34a6bab39899841f3189d7621c8ba227032f0f32e6e20dfcf85') + version('2.1.0', sha256='58a1ca7b5a47719933782c050e67d0eb3823a7384cfc3c434fece41724c307e6') + version('2.0.0', sha256='038f81f92fbba001ed23b56c1229a4f3b41e0c32e00bc92ea58d042909e3855a') + version('1.9.0', sha256='55ef552b351328c287194aa99fa2b797e6632dc3fa88dfccd58264602012e044') + version('1.8.3', sha256='aa82742fd4d7c68bfbef1367c4c605e06f9fed479a753db96aa6659407fcc4fd') + version('1.8.2', sha256='56be98d31693253543f3e657c8f8edc7979c89fdb0ede1bdddfb3a9f5d4cfc3a') + version('1.8.1', sha256='7e06d22350bec30220186e796caa93e9bfebd8d771a7efd35673897248437c61') + version('1.8.0', sha256='7b28f9163f74583b1542b87c48f28a3ad1338da6136d8e3ca0aeba21095f5fe0') + version('1.7.0', sha256='180741f590f210474b686d60241ad59e008221751ead21f0950c59aff93e54fd') + version('1.6.0', sha256='1affd9e779f48477402e4150f315b3179204cbbc920db2d0129cd9c38bd18b26') + version('1.5.1', sha256='9f24e9824286d5b0302c7e440f4803a8e3b8da50e1260e78c3b3c2eb587b317a') + version('1.5.0', sha256='b7fe63e8caacc5c038ab567fe505d275288eedaa1aed6c379057629eef126006') + version('1.4.0', sha256='067c94659bb7859904e20e72a676f94f103e6e012b7dba8071f51e8a6e624dbb') + version('1.3.0', sha256='5ce41c8492c2fcf809a7135bf8335a01a98ea85fb556b3d00bd4260151efd12f') + version('1.2.1', sha256='2d0380b819f778d8d9c2a462af90bd6a6188121e4edcc6202d936130b59bab17') + version('1.2.0', sha256='ff5869f6dc9465f429e54686e12c39becac57a83273542179a59bac7561b6404') + version('1.1.3', sha256='4be3cd9e6f808cdc5511991be2756f5fa838b6ecd01806fdbe7aec0aa382f946') + version('1.1.2', sha256='a15b5d3339481446dec1b719d7d531a87a2e9d11c9fe8044e270ea69611b07c8') + version('1.1.1', sha256='bd87fefee6bb8368216755342dc80ab3f8f3c813732dd03c6f94135d45f7036b') + + depends_on('yoda', type=('build', 'run'), when='@2.0.0:') + depends_on('yoda@1.8.0:', type=('build', 'run'), when='@3.1.0:') + + depends_on('hepmc', type=('build', 'run')) + depends_on('boost', when='@:2.5.0,3:', type=('build', 'run')) + depends_on('fastjet', type=('build', 'run')) + depends_on('gsl', type=('build', 'run'), when='@:2.6.0,2.6.2:') + depends_on('python', type=('build', 'run')) + depends_on('swig', type=('build', 'run')) + depends_on('yaml-cpp', when='@2.0.0:2.1.2', type=('build', 'run')) + + patch('rivet-1.8.2.patch', when='@1.8.2', level=0) + patch('rivet-1.9.0.patch', when='@1.9.0', level=0) + patch('rivet-2.2.0.patch', when='@2.2.0', level=0) + patch('rivet-2.2.1.patch', when='@2.2.1', level=0) + patch('rivet-2.4.0.patch', when='@2.4.0', level=0) + patch('rivet-2.4.2.patch', when='@2.4.2', level=0) + patch('rivet-2.4.3.patch', when='@2.4.3', level=0) + patch('rivet-2.5.1.patch', when='@2.5.1', level=0) + patch('rivet-2.5.2.patch', when='@2.5.2', level=0) + patch('rivet-2.5.3.patch', when='@2.5.3', level=0) + patch('rivet-2.5.4.patch', when='@2.5.4', level=0) + patch('rivet-2.6.0.patch', when='@2.6.0', level=0) + patch('rivet-2.6.1.patch', when='@2.6.1', level=0) + patch('rivet-2.6.2.patch', when='@2.6.2', level=0) + patch('rivet-2.7.0.patch', when='@2.7.0', level=0) + patch('rivet-3.0.0.patch', when='@3.0.0', level=0) + patch('rivet-3.0.1.patch', when='@3.0.1', level=0) + patch('rivet-3.1.0.patch', when='@3.1.0', level=0) + patch('rivet-3.1.1.patch', when='@3.1.1', level=0) + + @run_before('configure') + def copy_gsl_m4(self): + if self.spec.satisfies('@2.6.2:'): + copy('rivet/gsl.m4', 'm4/gsl.m4') + + @property + def force_autoreconf(self): + return self.version >= Version('2.6.2') + + def configure_args(self): + args = [] + args += ['--with-hepmc=' + self.spec['hepmc'].prefix] + + if self.spec.satisfies('@:1.999.999'): + args += ['--with-boost-incpath=' + self.spec['boost'].includes] + else: + if spec.satisfies('@:2.5.0,3:'): + args += ['--with-boost=' + self.spec['boost'].prefix] + + args += ['--with-fastjet=' + self.spec['fastjet'].prefix] + if self.spec.satisfies('@2:'): + args += ['--with-yoda=' + self.spec['yoda'].prefix] + + if self.spec.satisfies('@:2.6.0,2.6.2:'): + args += ['--with-gsl=' + self.spc['gsl'].prefix] + + args += ['--disable-pdfmanual', '--enable-unvalidated'] + + if self.spec.satisfies('@2:'): + args += ['--enable-stdcxx11'] + + return args diff --git a/var/spack/repos/builtin/packages/rivet/rivet-1.8.2.patch b/var/spack/repos/builtin/packages/rivet/rivet-1.8.2.patch new file mode 100644 index 0000000000..95cbe774a0 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-1.8.2.patch @@ -0,0 +1,44 @@ +--- src/Tools/Makefile.in.orig 2013-05-15 14:02:25.000000000 +0200 ++++ src/Tools/Makefile.in 2013-05-15 14:03:14.000000000 +0200 +@@ -79,7 +79,7 @@ + libRivetTools_la-ParticleIdUtils.lo \ + libRivetTools_la-tinyxml.lo libRivetTools_la-tinyxmlerror.lo \ + libRivetTools_la-tinyxmlparser.lo \ +- libRivetTools_la-BinnedHistogram.lo \ ++# libRivetTools_la-BinnedHistogram.lo \ + libRivetTools_la-mt2_bisect.lo libRivetTools_la-RivetMT2.lo \ + libRivetTools_la-BinnedHistogram.lo + libRivetTools_la_OBJECTS = $(am_libRivetTools_la_OBJECTS) +@@ -371,7 +371,7 @@ + TinyXML/tinyxml.cpp \ + TinyXML/tinyxmlerror.cpp \ + TinyXML/tinyxmlparser.cpp \ +- BinnedHistogram.cc \ ++# BinnedHistogram.cc \ + mt2_bisect.cc \ + RivetMT2.cc \ + BinnedHistogram.cc +--- include/LWH/Axis.h.orig 2013-05-14 18:30:02.000000000 +0200 ++++ include/LWH/Axis.h 2013-05-14 18:31:35.000000000 +0200 + +@@ -115,7 +115,7 @@ + * + */ + int coordToIndex(double coord) const { +- assert( ! isnan(coord) ); ++ assert( ! std::isnan(coord) ); + if ( coord >= upper ) return OVERFLOW_BIN; + else if ( coord < lower ) return UNDERFLOW_BIN; + else return int((coord - lower)/binWidth(0)); + +--- src/Tools/Makefile.am.orig 2013-05-15 13:14:11.000000000 +0200 ++++ src/Tools/Makefile.am 2013-05-15 13:16:53.000000000 +0200 +@@ -14,7 +14,7 @@ + TinyXML/tinyxml.cpp \ + TinyXML/tinyxmlerror.cpp \ + TinyXML/tinyxmlparser.cpp \ +- BinnedHistogram.cc \ ++# BinnedHistogram.cc \ + mt2_bisect.cc \ + RivetMT2.cc \ + BinnedHistogram.cc diff --git a/var/spack/repos/builtin/packages/rivet/rivet-1.9.0.patch b/var/spack/repos/builtin/packages/rivet/rivet-1.9.0.patch new file mode 100644 index 0000000000..9d274550b7 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-1.9.0.patch @@ -0,0 +1,30 @@ +--- bin/rivet-buildplugin.in.orig 2014-09-02 11:22:32.000000000 +0200 ++++ bin/rivet-buildplugin.in 2014-09-02 11:26:31.000000000 +0200 +@@ -62,6 +62,7 @@ + mycppflags="" + prefix="@prefix@" + irivet="@includedir@" ++exec_prefix=@exec_prefix@ + test -n "$irivet" && mycppflags="$mycppflags -I${irivet}" + ihepmc="@HEPMCINCPATH@" + test -n "$ihepmc" && mycppflags="$mycppflags -I${ihepmc}" +@@ -74,7 +75,7 @@ + + ## Get Rivet system linker flags (duplicating that in rivet-config.in) + myldflags="" +-lrivet="@libdir@" ++lrivet="${exec_prefix}/lib" + test -n "$lrivet" && myldflags="$myldflags -L${lrivet}" + lhepmc="@HEPMCLIBPATH@" + test -n "$lhepmc" && myldflags="$myldflags -L${lhepmc}" +--- bin/rivet-findid 2015-06-23 09:15:28.000000001 +0200 ++++ bin/rivet-findid 2015-06-23 09:15:38.000000001 +0200 +@@ -170,7 +170,7 @@ + if k=='code': + entries[v] = c.text + if entries.get('9') == 'SPIRESTeX': +- result['bibtex'] = entries['z'] ++ result['bibtex'] = entries['a'] + + if i.get('tag') == '037': + entries = {} diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.2.0.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.2.0.patch new file mode 100644 index 0000000000..ac9268a252 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.2.0.patch @@ -0,0 +1,11 @@ +--- bin/rivet-findid 2015-06-23 09:39:49.000000001 +0200 ++++ bin/rivet-findid 2015-06-23 09:40:09.000000001 +0200 +@@ -160,7 +160,7 @@ + if k=='code': + entries[v] = c.text + if entries.get('9') == 'SPIRESTeX': +- result['bibtex'] = entries['z'] ++ result['bibtex'] = entries['a'] + + if i.get('tag') == '037': + entries = {} diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.2.1.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.2.1.patch new file mode 100644 index 0000000000..a9fceb92c0 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.2.1.patch @@ -0,0 +1,11 @@ +--- bin/rivet-findid 2015-06-23 09:40:38.000000001 +0200 ++++ bin/rivet-findid 2015-06-23 09:40:45.000000001 +0200 +@@ -160,7 +160,7 @@ + if k=='code': + entries[v] = c.text + if entries.get('9') == 'SPIRESTeX': +- result['bibtex'] = entries['z'] ++ result['bibtex'] = entries['a'] + + if i.get('tag') == '037': + entries = {} diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.4.0.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.4.0.patch new file mode 100644 index 0000000000..7ce4f1dd55 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.4.0.patch @@ -0,0 +1,12 @@ +--- configure 2015-10-07 12:35:57.000000000 +0300 ++++ configure 2015-10-09 16:18:02.432562522 +0300 +@@ -18728,7 +18728,7 @@ + ## Boost utility library + echo "$as_me: this is boost.m4 serial 24" >&5 + boost_save_IFS=$IFS +-boost_version_req=1.55.0 ++boost_version_req=1.53.0 + IFS=. + set x $boost_version_req 0 0 0 + IFS=$boost_save_IFS + diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.4.2.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.4.2.patch new file mode 100644 index 0000000000..98436c5acf --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.4.2.patch @@ -0,0 +1,39 @@ +--- configure.orig 2016-09-30 14:12:42.317369715 +0200 ++++ configure 2016-09-30 14:17:21.690229397 +0200 +@@ -19644,11 +19644,15 @@ + cat >conftest.py <<_ACEOF + + import sys, string ++# Python 2 and 3 compatible ++from future.builtins import map ++# Python 2 and 3: forward-compatible ++from future.builtins import range + # split strings by '.' and convert to numeric. Append some zeros + # because we need at least 4 digits for the hex conversion. +-minver = map(int, string.split('2.5', '.')) + [0, 0, 0] ++minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] + minverhex = 0 +-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i] ++for i in range(0, 4): minverhex = (minverhex << 8) + minver[i] + if sys.hexversion >= minverhex: + sys.exit( 0 ) + else: +@@ -19676,15 +19680,15 @@ + fi + + +- PYTHON_VERSION=`$PYTHON -c "import sys; print '.'.join(map(str, sys.version_info[:2]));"` ++ PYTHON_VERSION=`$PYTHON -c "from __future__ import print_function; import sys; print('.'.join(map(str, sys.version_info[:2])));"` + +- RIVET_PYTHONPATH=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True);"` ++ RIVET_PYTHONPATH=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True));"` + + ## Test for Python header + if test -x "$PYTHON"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for Python include path" >&5 + $as_echo_n "checking for Python include path... " >&6; } +- python_incpath=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_inc();"` ++ python_incpath=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_inc());"` + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $python_incpath" >&5 + $as_echo "$python_incpath" >&6; } + python_header="$python_incpath/Python.h" diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.4.3.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.4.3.patch new file mode 100644 index 0000000000..9d006df8c0 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.4.3.patch @@ -0,0 +1,39 @@ +--- configure.orig 2016-06-28 23:57:35.000000000 +0200 ++++ configure 2016-09-19 12:44:23.411192406 +0200 +@@ -19643,11 +19643,15 @@ + cat >conftest.py <<_ACEOF + + import sys, string ++# Python 2 and 3 compatible ++from future.builtins import map ++# Python 2 and 3: forward-compatible ++from future.builtins import range + # split strings by '.' and convert to numeric. Append some zeros + # because we need at least 4 digits for the hex conversion. +-minver = map(int, string.split('2.5', '.')) + [0, 0, 0] ++minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] + minverhex = 0 +-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i] ++for i in range(0, 4): minverhex = (minverhex << 8) + minver[i] + if sys.hexversion >= minverhex: + sys.exit( 0 ) + else: +@@ -19675,15 +19679,15 @@ + fi + + +- PYTHON_VERSION=`$PYTHON -c "import sys; print '.'.join(map(str, sys.version_info[:2]));"` ++ PYTHON_VERSION=`$PYTHON -c "from __future__ import print_function; import sys; print('.'.join(map(str, sys.version_info[:2])));"` + +- RIVET_PYTHONPATH=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True);"` ++ RIVET_PYTHONPATH=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True));"` + + ## Test for Python header + if test -x "$PYTHON"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for Python include path" >&5 + $as_echo_n "checking for Python include path... " >&6; } +- python_incpath=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_inc();"` ++python_incpath=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_inc());"` + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $python_incpath" >&5 + $as_echo "$python_incpath" >&6; } + python_header="$python_incpath/Python.h" diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.5.1.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.5.1.patch new file mode 100644 index 0000000000..dc5f484203 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.5.1.patch @@ -0,0 +1,39 @@ +--- configure.orig 2016-09-30 09:25:10.000000000 +0200 ++++ configure 2016-09-30 09:27:01.000000000 +0200 +@@ -19681,11 +19681,15 @@ + cat >conftest.py <<_ACEOF + + import sys, string ++# Python 2 and 3 compatible ++from future.builtins import map ++# Python 2 and 3: forward-compatible ++from future.builtins import range + # split strings by '.' and convert to numeric. Append some zeros + # because we need at least 4 digits for the hex conversion. +-minver = map(int, string.split('2.5', '.')) + [0, 0, 0] ++minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] + minverhex = 0 +-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i] ++for i in range(0, 4): minverhex = (minverhex << 8) + minver[i] + if sys.hexversion >= minverhex: + sys.exit( 0 ) + else: +@@ -19713,15 +19717,15 @@ + fi + + +- PYTHON_VERSION=`$PYTHON -c "import sys; print '.'.join(map(str, sys.version_info[:2]));"` ++ PYTHON_VERSION=`$PYTHON -c "from __future__ import print_function; import sys; print('.'.join(map(str, sys.version_info[:2])));"` + +- RIVET_PYTHONPATH=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True);"` ++ RIVET_PYTHONPATH=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True));"` + + ## Test for Python header + if test -x "$PYTHON"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for Python include path" >&5 + $as_echo_n "checking for Python include path... " >&6; } +- python_incpath=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_inc();"` ++python_incpath=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_inc());"` + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $python_incpath" >&5 + $as_echo "$python_incpath" >&6; } + python_header="$python_incpath/Python.h" diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.5.2.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.5.2.patch new file mode 100644 index 0000000000..9f536d3751 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.5.2.patch @@ -0,0 +1,10 @@ +--- ./include/Rivet/Tools/RivetSTL.hh.orig 2017-08-03 11:49:33.005431033 +0200 ++++ ./include/Rivet/Tools/RivetSTL.hh 2017-08-03 11:50:13.817841608 +0200 +@@ -19,6 +19,7 @@ + #include + #include + #include ++#include + + + #ifndef foreach diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.5.3.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.5.3.patch new file mode 100644 index 0000000000..bebf5c73ab --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.5.3.patch @@ -0,0 +1,43 @@ +--- include/Rivet/Config/RivetCommon.hh.orig 2017-05-31 12:32:04.547062840 +0200 ++++ include/Rivet/Config/RivetCommon.hh 2017-05-31 12:32:12.379054886 +0200 +@@ -2,6 +2,7 @@ + #define RIVET_RivetCommon_HH + + // Convenience build-setup header for Rivet internal use ++#include + + // Automatic build info from autoconf + #include "Rivet/Config/RivetConfig.hh" +--- include/Rivet/Run.hh.orig 2017-05-31 12:36:00.225823486 +0200 ++++ include/Rivet/Run.hh 2017-05-31 12:36:18.653804770 +0200 +@@ -4,6 +4,7 @@ + + #include "Rivet/Tools/RivetSTL.hh" + #include "Rivet/Tools/RivetHepMC.hh" ++#include + + namespace Rivet { + +--- include/Rivet/Particle.hh.orig 2017-05-31 12:39:14.273626411 +0200 ++++ include/Rivet/Particle.hh 2017-05-31 14:00:02.387272379 +0200 +@@ -11,6 +11,8 @@ + // NOTE: Rivet/Tools/ParticleUtils.hh included at the end + #include "fastjet/PseudoJet.hh" + ++#include ++ + namespace Rivet { + + +--- include/Rivet/Tools/RivetSTL.hh.orig 2017-05-31 14:05:28.368975178 +0200 ++++ include/Rivet/Tools/RivetSTL.hh 2017-05-31 14:05:44.432960512 +0200 +@@ -1,6 +1,8 @@ + #ifndef RIVET_RivetSTL_HH + #define RIVET_RivetSTL_HH + ++#include ++ + #include + #include + #include + diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.5.4.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.5.4.patch new file mode 100644 index 0000000000..af338da6d5 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.5.4.patch @@ -0,0 +1,42 @@ +patch written by GENSER to avoid system libraries of GLS coming from fastjet-config +--- include/Rivet/Tools/JetUtils.hh ++++ include/Rivet/Tools/JetUtils.hh +@@ -47,4 +47,5 @@ + struct BoolJetFunctor { + virtual bool operator()(const Jet& p) const = 0; ++ virtual ~BoolJetFunctor() {} + }; + +--- include/Rivet/Tools/ParticleBaseUtils.hh ++++ include/Rivet/Tools/ParticleBaseUtils.hh +@@ -23,4 +23,5 @@ + struct BoolParticleBaseFunctor { + virtual bool operator()(const ParticleBase& p) const = 0; ++ virtual ~BoolParticleBaseFunctor() {} + }; + +@@ -397,4 +398,5 @@ + struct DoubleParticleBaseFunctor { + virtual double operator()(const ParticleBase& p) const = 0; ++ virtual ~DoubleParticleBaseFunctor() {} + }; + +--- include/Rivet/Tools/ParticleUtils.hh ++++ include/Rivet/Tools/ParticleUtils.hh +@@ -486,4 +486,5 @@ + struct BoolParticleFunctor { + virtual bool operator()(const Particle& p) const = 0; ++ virtual ~BoolParticleFunctor() {} + }; + +--- src/Makefile.in.orig 2018-01-30 13:52:58.641670247 +0100 ++++ src/Makefile.in 2018-01-30 13:53:19.377586118 +0100 +@@ -449,7 +449,7 @@ + libRivet_la_SOURCES = + libRivet_la_LDFLAGS = -export-dynamic -avoid-version -L$(YODALIBPATH) -L$(HEPMCLIBPATH) + libRivet_la_LIBADD = Core/libRivetCore.la Projections/libRivetProjections.la Tools/libRivetTools.la $(ANA_LIBADD) \ +- -lYODA -lHepMC -ldl -lm $(FASTJETCONFIGLIBADD) $(GSL_LDFLAGS) ++ -lYODA -lHepMC -ldl -lm $(GSL_LDFLAGS) $(FASTJETCONFIGLIBADD) + + all: all-recursive + diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.6.0.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.6.0.patch new file mode 100644 index 0000000000..2cb7cab14b --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.6.0.patch @@ -0,0 +1,90 @@ +--- include/Rivet/Tools/JetUtils.hh ++++ include/Rivet/Tools/JetUtils.hh +@@ -47,4 +47,5 @@ + struct BoolJetFunctor { + virtual bool operator()(const Jet& p) const = 0; ++ virtual ~BoolJetFunctor() {} + }; + +--- include/Rivet/Tools/ParticleBaseUtils.hh ++++ include/Rivet/Tools/ParticleBaseUtils.hh +@@ -23,4 +23,5 @@ + struct BoolParticleBaseFunctor { + virtual bool operator()(const ParticleBase& p) const = 0; ++ virtual ~BoolParticleBaseFunctor() {} + }; + +@@ -397,4 +398,5 @@ + struct DoubleParticleBaseFunctor { + virtual double operator()(const ParticleBase& p) const = 0; ++ virtual ~DoubleParticleBaseFunctor() {} + }; + +--- include/Rivet/Tools/ParticleUtils.hh ++++ include/Rivet/Tools/ParticleUtils.hh +@@ -486,4 +486,5 @@ + struct BoolParticleFunctor { + virtual bool operator()(const Particle& p) const = 0; ++ virtual ~BoolParticleFunctor() {} + }; + +--- analyses/Makefile.in.orig 2018-06-28 09:22:46.722022129 +0200 ++++ analyses/Makefile.in 2018-06-28 10:11:59.772373529 +0200 +@@ -523,21 +523,21 @@ + @ENABLE_ANALYSES_TRUE@%.so: + @ENABLE_ANALYSES_TRUE@ @+echo && RIVET_BUILDPLUGIN_BEFORE_INSTALL=1 bash $(top_builddir)/bin/rivet-buildplugin -j2 $@ $^ -I$(top_builddir)/include + +-@ENABLE_ANALYSES_TRUE@RivetALICEAnalyses.so: $(shell ls $(srcdir)/pluginALICE/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetATLASAnalyses.so: $(shell ls $(srcdir)/pluginATLAS/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetCDFAnalyses.so : $(shell ls $(srcdir)/pluginCDF/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetCMSAnalyses.so : $(shell ls $(srcdir)/pluginCMS/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetD0Analyses.so : $(shell ls $(srcdir)/pluginD0/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetHERAAnalyses.so : $(shell ls $(srcdir)/pluginHERA/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetLEPAnalyses.so : $(shell ls $(srcdir)/pluginLEP/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetLHCbAnalyses.so : $(shell ls $(srcdir)/pluginLHCb/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetLHCfAnalyses.so : $(shell ls $(srcdir)/pluginLHCf/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetMCAnalyses.so : $(shell ls $(srcdir)/pluginMC/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetMiscAnalyses.so : $(shell ls $(srcdir)/pluginMisc/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetPetraAnalyses.so: $(shell ls $(srcdir)/pluginPetra/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetRHICAnalyses.so : $(shell ls $(srcdir)/pluginRHIC/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetSPSAnalyses.so : $(shell ls $(srcdir)/pluginSPS/*.cc) +-@ENABLE_ANALYSES_TRUE@RivetTOTEMAnalyses.so: $(shell ls $(srcdir)/pluginTOTEM/*.cc) ++@ENABLE_ANALYSES_TRUE@RivetALICEAnalyses.so: $(shell find $(srcdir)/pluginALICE/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetATLASAnalyses.so: $(shell find $(srcdir)/pluginATLAS/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetCDFAnalyses.so : $(shell find $(srcdir)/pluginCDF/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetCMSAnalyses.so : $(shell find $(srcdir)/pluginCMS/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetD0Analyses.so : $(shell find $(srcdir)/pluginD0/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetHERAAnalyses.so : $(shell find $(srcdir)/pluginHERA/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetLEPAnalyses.so : $(shell find $(srcdir)/pluginLEP/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetLHCbAnalyses.so : $(shell find $(srcdir)/pluginLHCb/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetLHCfAnalyses.so : $(shell find $(srcdir)/pluginLHCf/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetMCAnalyses.so : $(shell find $(srcdir)/pluginMC/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetMiscAnalyses.so : $(shell find $(srcdir)/pluginMisc/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetPetraAnalyses.so: $(shell find $(srcdir)/pluginPetra/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetRHICAnalyses.so : $(shell find $(srcdir)/pluginRHIC/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetSPSAnalyses.so : $(shell find $(srcdir)/pluginSPS/ -name '*.cc' -not -name 'tmp*') ++@ENABLE_ANALYSES_TRUE@RivetTOTEMAnalyses.so: $(shell find $(srcdir)/pluginTOTEM/ -name '*.cc' -not -name 'tmp*') + + @ENABLE_ANALYSES_TRUE@all-local: $(PLUGIN_LIBS) $(PLUGIN_DATAFILES) + @ENABLE_ANALYSES_TRUE@ mkdir -p $(builddir)/data +--- analyses/pluginATLAS/ATLAS_2016_CONF_2016_037.cc.orig 2018-07-02 10:43:08.656094368 +0200 ++++ analyses/pluginATLAS/ATLAS_2016_CONF_2016_037.cc 2018-07-02 10:44:04.920361160 +0200 +@@ -2,6 +2,7 @@ + #include "Rivet/Analysis.hh" + #include "Rivet/Projections/FinalState.hh" + #include "Rivet/Projections/PromptFinalState.hh" ++#include "Rivet/Projections/ChargedFinalState.hh" + #include "Rivet/Projections/FastJets.hh" + #include "Rivet/Projections/Sphericity.hh" + #include "Rivet/Projections/SmearedParticles.hh" +--- include/Rivet/AnalysisHandler.hh.orig 2018-07-10 10:39:21.719532209 +0200 ++++ include/Rivet/AnalysisHandler.hh 2018-07-10 10:39:29.225608530 +0200 +@@ -17,7 +17,7 @@ + + // Needed to make smart pointers compare equivalent in the STL set + struct CmpAnaHandle { +- bool operator() (const AnaHandle& a, const AnaHandle& b) { ++ bool operator() (const AnaHandle& a, const AnaHandle& b) const { + return a.get() < b.get(); + } + }; diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.6.1.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.6.1.patch new file mode 100644 index 0000000000..878e72d739 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.6.1.patch @@ -0,0 +1,24 @@ +--- doc/Makefile.in.orig 2018-10-17 18:29:15.568630034 +0200 ++++ doc/Makefile.in 2018-10-17 18:31:45.829375147 +0200 +@@ -594,15 +594,15 @@ + .PRECIOUS: Makefile + + @ENABLE_PYEXT_TRUE@analyses.html: $(top_srcdir)/analyses $(srcdir)/mk-analysis-html +-@ENABLE_PYEXT_TRUE@ LD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(LD_LIBRARY_PATH) \ +-@ENABLE_PYEXT_TRUE@ DYLD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(DYLD_LIBRARY_PATH) \ ++@ENABLE_PYEXT_TRUE@ LD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(HEPMCLIBPATH):$(FASTJETLIBPATH):$(YODALIBPATH):$(RIVETLIBPATH):$(LD_LIBRARY_PATH) \ ++@ENABLE_PYEXT_TRUE@ DYLD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(HEPMCLIBPATH):$(FASTJETLIBPATH):$(YODALIBPATH):$(RIVETLIBPATH):$(DYLD_LIBRARY_PATH) \ + @ENABLE_PYEXT_TRUE@ PYTHONPATH=$(YODA_PYTHONPATH):$(RIVET_PYTHONPATH):$(PYTHONPATH) \ +-@ENABLE_PYEXT_TRUE@ $(srcdir)/mk-analysis-html ++@ENABLE_PYEXT_TRUE@ $(PYTHON) $(srcdir)/mk-analysis-html + @ENABLE_PYEXT_TRUE@analyses.json: $(top_srcdir)/analyses $(srcdir)/mk-analysis-json +-@ENABLE_PYEXT_TRUE@ LD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(LD_LIBRARY_PATH) \ +-@ENABLE_PYEXT_TRUE@ DYLD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(DYLD_LIBRARY_PATH) \ ++@ENABLE_PYEXT_TRUE@ LD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(HEPMCLIBPATH):$(FASTJETLIBPATH):$(YODALIBPATH):$(RIVETLIBPATH):$(LD_LIBRARY_PATH) \ ++@ENABLE_PYEXT_TRUE@ DYLD_LIBRARY_PATH=$(top_builddir)/src/.libs:$(HEPMCLIBPATH):$(FASTJETLIBPATH):$(YODALIBPATH):$(RIVETLIBPATH):$(DYLD_LIBRARY_PATH) \ + @ENABLE_PYEXT_TRUE@ PYTHONPATH=$(YODA_PYTHONPATH):$(RIVET_PYTHONPATH):$(PYTHONPATH) \ +-@ENABLE_PYEXT_TRUE@ $(srcdir)/mk-analysis-json ++@ENABLE_PYEXT_TRUE@ $(PYTHON) $(srcdir)/mk-analysis-json + + @WITH_ASCIIDOC_TRUE@compare-histos.html: compare-histos.txt + @WITH_ASCIIDOC_TRUE@ asciidoc -a toc compare-histos.txt diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.6.2.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.6.2.patch new file mode 100644 index 0000000000..a327f481d4 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.6.2.patch @@ -0,0 +1,97 @@ +--- configure.ac.orig 2019-01-23 11:02:06.206570992 +0100 ++++ configure.ac 2019-01-23 11:02:26.704761899 +0100 +@@ -151,12 +151,12 @@ + + + # ## GNU Scientific Library +-# AC_SEARCH_GSL +-# AC_CEDAR_HEADERS([gsl], , , [AC_MSG_ERROR([GSL (GNU Scientific Library) is required])]) +-# oldCPPFLAGS=$CPPFLAGS +-# CPPFLAGS="$CPPFLAGS -I$GSLINCPATH" +-# AC_CHECK_HEADER([gsl/gsl_vector.h], [], [AC_MSG_ERROR([GSL vectors not found.])]) +-# CPPFLAGS=$oldCPPFLAGS ++AC_SEARCH_GSL ++AC_CEDAR_HEADERS([gsl], , , [AC_MSG_ERROR([GSL (GNU Scientific Library) is required])]) ++oldCPPFLAGS=$CPPFLAGS ++CPPFLAGS="$CPPFLAGS -I$GSLINCPATH" ++AC_CHECK_HEADER([gsl/gsl_vector.h], [], [AC_MSG_ERROR([GSL vectors not found.])]) ++CPPFLAGS=$oldCPPFLAGS + + + ## Disable build/install of standard analyses +@@ -256,7 +256,7 @@ + ## Set default build flags + AM_CPPFLAGS="-I\$(top_srcdir)/include -I\$(top_builddir)/include" + #AM_CPPFLAGS="$AM_CPPFLAGS -I\$(top_srcdir)/include/eigen3" +-#AM_CPPFLAGS="$AM_CPPFLAGS \$(GSL_CPPFLAGS)" ++AM_CPPFLAGS="$AM_CPPFLAGS \$(GSL_CPPFLAGS)" + dnl AM_CPPFLAGS="$AM_CPPFLAGS \$(BOOST_CPPFLAGS)" + AM_CPPFLAGS="$AM_CPPFLAGS -I\$(YODAINCPATH)" + AM_CPPFLAGS="$AM_CPPFLAGS -I\$(HEPMCINCPATH)" +--- bin/rivet-config.in.orig 2019-01-23 11:08:04.608907832 +0100 ++++ bin/rivet-config.in 2019-01-23 11:08:25.058098155 +0100 +@@ -82,8 +82,8 @@ + test -n "$iyoda" && OUT="$OUT -I${iyoda}" + ifastjet="@FASTJETINCPATH@" + test -n "$ifastjet" && OUT="$OUT -I${ifastjet}" +- # igsl="@GSLINCPATH@" +- # test -n "$igsl" && OUT="$OUT -I${igsl}" ++ igsl="@GSLINCPATH@" ++ test -n "$igsl" && OUT="$OUT -I${igsl}" + # iboost="@BOOST_CPPFLAGS@" + # test -n "$iboost" && OUT="$OUT ${iboost}" + fi +@@ -98,8 +98,8 @@ + test -n "$lyoda" && OUT="$OUT -L${lyoda} -lYODA" + lfastjet="@FASTJETCONFIGLIBADD@" + test -n "$lfastjet" && OUT="$OUT ${lfastjet}" +- # lgsl="@GSLLIBPATH@" +- # test -n "$lgsl" && OUT="$OUT -L${lgsl}" ++ lgsl="@GSLLIBPATH@" ++ test -n "$lgsl" && OUT="$OUT -L${lgsl}" + fi + + tmp=$( echo "$*" | egrep -- '--\|--\') +--- bin/rivet-buildplugin.in.orig 2019-01-23 11:10:07.804054317 +0100 ++++ bin/rivet-buildplugin.in 2019-01-23 11:10:34.370301517 +0100 +@@ -169,8 +169,8 @@ + test -n "$iyoda" && mycppflags="$mycppflags -I${iyoda}" + ifastjet="@FASTJETINCPATH@" + test -n "$ifastjet" && mycppflags="$mycppflags -I${ifastjet}" +-# igsl="@GSLINCPATH@" +-# test -n "$igsl" && mycppflags="$mycppflags -I${igsl}" ++igsl="@GSLINCPATH@" ++test -n "$igsl" && mycppflags="$mycppflags -I${igsl}" + # iboost="@BOOST_CPPFLAGS@" + # test -n "$iboost" && mycppflags="$mycppflags ${iboost}" + +--- pyext/setup.py.in.orig 2019-01-23 11:12:04.694141901 +0100 ++++ pyext/setup.py.in 2019-01-23 11:12:44.531512512 +0100 +@@ -29,11 +29,11 @@ + + + ## Be careful with extracting the GSL path from the flags string +-# import re +-# re_libdirflag = re.compile(r".*-L\s*(\S+).*") +-# re_match = re_libdirflag.search("@GSL_LDFLAGS@") +-# if re_match: +- # lookupdirs.append( re_match.group(1) ) ++import re ++re_libdirflag = re.compile(r".*-L\s*(\S+).*") ++re_match = re_libdirflag.search("@GSL_LDFLAGS@") ++if re_match: ++ lookupdirs.append( re_match.group(1) ) + + ## A helper function + def ext(name, depends=[], statics=[]): +@@ -47,8 +47,8 @@ + language="c++", + # depends=depends, + include_dirs=[incdir1, incdir2, incdir3, incdir4], +- # extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@ @GSLCPPFLAGS@".split(), +- extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@".split(), ++ extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@ @GSLCPPFLAGS@".split(), ++ # extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@".split(), + extra_link_args=BASE_LINK_ARGS, + library_dirs=lookupdirs, + runtime_library_dirs=lookupdirs[1:], diff --git a/var/spack/repos/builtin/packages/rivet/rivet-2.7.0.patch b/var/spack/repos/builtin/packages/rivet/rivet-2.7.0.patch new file mode 100644 index 0000000000..a327f481d4 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-2.7.0.patch @@ -0,0 +1,97 @@ +--- configure.ac.orig 2019-01-23 11:02:06.206570992 +0100 ++++ configure.ac 2019-01-23 11:02:26.704761899 +0100 +@@ -151,12 +151,12 @@ + + + # ## GNU Scientific Library +-# AC_SEARCH_GSL +-# AC_CEDAR_HEADERS([gsl], , , [AC_MSG_ERROR([GSL (GNU Scientific Library) is required])]) +-# oldCPPFLAGS=$CPPFLAGS +-# CPPFLAGS="$CPPFLAGS -I$GSLINCPATH" +-# AC_CHECK_HEADER([gsl/gsl_vector.h], [], [AC_MSG_ERROR([GSL vectors not found.])]) +-# CPPFLAGS=$oldCPPFLAGS ++AC_SEARCH_GSL ++AC_CEDAR_HEADERS([gsl], , , [AC_MSG_ERROR([GSL (GNU Scientific Library) is required])]) ++oldCPPFLAGS=$CPPFLAGS ++CPPFLAGS="$CPPFLAGS -I$GSLINCPATH" ++AC_CHECK_HEADER([gsl/gsl_vector.h], [], [AC_MSG_ERROR([GSL vectors not found.])]) ++CPPFLAGS=$oldCPPFLAGS + + + ## Disable build/install of standard analyses +@@ -256,7 +256,7 @@ + ## Set default build flags + AM_CPPFLAGS="-I\$(top_srcdir)/include -I\$(top_builddir)/include" + #AM_CPPFLAGS="$AM_CPPFLAGS -I\$(top_srcdir)/include/eigen3" +-#AM_CPPFLAGS="$AM_CPPFLAGS \$(GSL_CPPFLAGS)" ++AM_CPPFLAGS="$AM_CPPFLAGS \$(GSL_CPPFLAGS)" + dnl AM_CPPFLAGS="$AM_CPPFLAGS \$(BOOST_CPPFLAGS)" + AM_CPPFLAGS="$AM_CPPFLAGS -I\$(YODAINCPATH)" + AM_CPPFLAGS="$AM_CPPFLAGS -I\$(HEPMCINCPATH)" +--- bin/rivet-config.in.orig 2019-01-23 11:08:04.608907832 +0100 ++++ bin/rivet-config.in 2019-01-23 11:08:25.058098155 +0100 +@@ -82,8 +82,8 @@ + test -n "$iyoda" && OUT="$OUT -I${iyoda}" + ifastjet="@FASTJETINCPATH@" + test -n "$ifastjet" && OUT="$OUT -I${ifastjet}" +- # igsl="@GSLINCPATH@" +- # test -n "$igsl" && OUT="$OUT -I${igsl}" ++ igsl="@GSLINCPATH@" ++ test -n "$igsl" && OUT="$OUT -I${igsl}" + # iboost="@BOOST_CPPFLAGS@" + # test -n "$iboost" && OUT="$OUT ${iboost}" + fi +@@ -98,8 +98,8 @@ + test -n "$lyoda" && OUT="$OUT -L${lyoda} -lYODA" + lfastjet="@FASTJETCONFIGLIBADD@" + test -n "$lfastjet" && OUT="$OUT ${lfastjet}" +- # lgsl="@GSLLIBPATH@" +- # test -n "$lgsl" && OUT="$OUT -L${lgsl}" ++ lgsl="@GSLLIBPATH@" ++ test -n "$lgsl" && OUT="$OUT -L${lgsl}" + fi + + tmp=$( echo "$*" | egrep -- '--\|--\') +--- bin/rivet-buildplugin.in.orig 2019-01-23 11:10:07.804054317 +0100 ++++ bin/rivet-buildplugin.in 2019-01-23 11:10:34.370301517 +0100 +@@ -169,8 +169,8 @@ + test -n "$iyoda" && mycppflags="$mycppflags -I${iyoda}" + ifastjet="@FASTJETINCPATH@" + test -n "$ifastjet" && mycppflags="$mycppflags -I${ifastjet}" +-# igsl="@GSLINCPATH@" +-# test -n "$igsl" && mycppflags="$mycppflags -I${igsl}" ++igsl="@GSLINCPATH@" ++test -n "$igsl" && mycppflags="$mycppflags -I${igsl}" + # iboost="@BOOST_CPPFLAGS@" + # test -n "$iboost" && mycppflags="$mycppflags ${iboost}" + +--- pyext/setup.py.in.orig 2019-01-23 11:12:04.694141901 +0100 ++++ pyext/setup.py.in 2019-01-23 11:12:44.531512512 +0100 +@@ -29,11 +29,11 @@ + + + ## Be careful with extracting the GSL path from the flags string +-# import re +-# re_libdirflag = re.compile(r".*-L\s*(\S+).*") +-# re_match = re_libdirflag.search("@GSL_LDFLAGS@") +-# if re_match: +- # lookupdirs.append( re_match.group(1) ) ++import re ++re_libdirflag = re.compile(r".*-L\s*(\S+).*") ++re_match = re_libdirflag.search("@GSL_LDFLAGS@") ++if re_match: ++ lookupdirs.append( re_match.group(1) ) + + ## A helper function + def ext(name, depends=[], statics=[]): +@@ -47,8 +47,8 @@ + language="c++", + # depends=depends, + include_dirs=[incdir1, incdir2, incdir3, incdir4], +- # extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@ @GSLCPPFLAGS@".split(), +- extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@".split(), ++ extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@ @GSLCPPFLAGS@".split(), ++ # extra_compile_args="-I@prefix@/include @PYEXT_CXXFLAGS@ @HEPMCCPPFLAGS@ @FASTJETCPPFLAGS@ @YODACPPFLAGS@".split(), + extra_link_args=BASE_LINK_ARGS, + library_dirs=lookupdirs, + runtime_library_dirs=lookupdirs[1:], diff --git a/var/spack/repos/builtin/packages/rivet/rivet-3.0.0.patch b/var/spack/repos/builtin/packages/rivet/rivet-3.0.0.patch new file mode 100644 index 0000000000..229bfb4acc --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-3.0.0.patch @@ -0,0 +1,70 @@ +--- bin/rivet-buildplugin.in.orig Mon Jul 08 15:16:09 2019 +0100 ++++ bin/rivet-buildplugin.in Wed Jul 10 16:15:41 2019 +0100 +@@ -172,4 +172,6 @@ + ifastjet="@FASTJETINCPATH@" + test -n "$ifastjet" && mycppflags="$mycppflags -I${ifastjet}" ++ifjcontrib="@FJCONTRIBCPPFLAGS@" ++test -n "$ifjcontrib" && mycppflags="$mycppflags ${ifjcontrib}" + + ## Get Rivet system linker flags (duplicating that in rivet-config.in) +--- bin/rivet-config.in.orig Mon Jul 08 15:16:09 2019 +0100 ++++ bin/rivet-config.in Wed Jul 10 16:15:41 2019 +0100 +@@ -83,4 +83,6 @@ + ifastjet="@FASTJETINCPATH@" + test -n "$ifastjet" && OUT="$OUT -I${ifastjet}" ++ ifjcontrib="@FJCONTRIBCPPFLAGS@" ++ test -n "$ifjcontrib" && OUT="$OUT ${ifjcontrib}" + fi + +--- configure.ac.orig Mon Jul 08 15:16:09 2019 +0100 ++++ configure.ac Wed Jul 10 16:15:41 2019 +0100 +@@ -197,10 +197,26 @@ + FASTJETLIBADD="$FASTJETLIBADD -lEECambridgePlugin -lJadePlugin" + fi; ++ ++## FastJet contrib (allow paths specified separately from FJ) ++AC_ARG_WITH([fjcontrib], ++ [AC_HELP_STRING(--with-fjcontrib, path to FastJet Contrib @<:@$FASTJETPATH@:>@)], [], []) ++if test -n "$with_fjcontrib"; then ++ AC_MSG_NOTICE([FastJet Contrib base path given: $with_fjcontrib]) ++ FJCONTRIBINCPATH=$with_fjcontrib/include ++ FJCONTRIBLIBPATH=$with_fjcontrib/lib ++ FJCONTRIBCPPFLAGS=-I$FJCONTRIBINCPATH ++ AC_SUBST(FJCONTRIBINCPATH) ++ AC_SUBST(FJCONTRIBLIBPATH) ++ AC_SUBST(FJCONTRIBCPPFLAGS) ++ FASTJETLIBADD="-L$FJCONTRIBLIBPATH $FASTJETLIBADD" ++fi + FASTJETLIBADD="$FASTJETLIBADD -lfastjetcontribfragile -lfastjettools" ++ ++## Test FastJet + Contrib ++## Check for FastJet headers that require the --enable-all(cxx)plugins option + AC_MSG_NOTICE([FastJet LIBADD = $FASTJETLIBADD]) + AC_SUBST(FASTJETLIBADD) +-# Check for FastJet headers that require the --enable-all(cxx)plugins option + oldCPPFLAGS=$CPPFLAGS +-CPPFLAGS="$CPPFLAGS -I$FASTJETINCPATH" ++CPPFLAGS="$CPPFLAGS $FASTJETCPPFLAGS $FJCONTRIBCPPFLAGS" + oldLIBS=$LIBS + LIBS="$LIBS $FASTJETLIBADD" +@@ -339,5 +355,4 @@ + #AM_CPPFLAGS="$AM_CPPFLAGS -I\$(top_srcdir)/include/eigen3" + #AM_CPPFLAGS="$AM_CPPFLAGS \$(GSL_CPPFLAGS)" +-dnl AM_CPPFLAGS="$AM_CPPFLAGS \$(BOOST_CPPFLAGS)" + AM_CPPFLAGS="$AM_CPPFLAGS -I\$(YODAINCPATH)" + if test x$use_hepmc2 = xyes ; then +@@ -346,5 +361,5 @@ + AM_CPPFLAGS="$AM_CPPFLAGS -I\$(HEPMC3INCPATH)" + fi +-AM_CPPFLAGS="$AM_CPPFLAGS -I\$(FASTJETINCPATH)" ++AM_CPPFLAGS="$AM_CPPFLAGS \$(FASTJETCPPFLAGS) \$(FJCONTRIBCPPFLAGS)" + AC_CEDAR_CHECKCXXFLAG([-pedantic], [AM_CXXFLAGS="$AM_CXXFLAGS -pedantic"]) + AC_CEDAR_CHECKCXXFLAG([-Wall], [AM_CXXFLAGS="$AM_CXXFLAGS -Wall"]) +--- src/AnalysisTools/Makefile.am.org Mon Jul 08 15:16:09 2019 +0100 ++++ src/AnalysisTools/Makefile.am Wed Jul 10 16:15:41 2019 +0100 +@@ -6,4 +6,4 @@ + MC_JetSplittings.cc + +-libRivetAnalysisTools_la_LDFLAGS = $(AM_LDFLAGS) -L$(FASTJETLIBPATH) ++libRivetAnalysisTools_la_LDFLAGS = $(AM_LDFLAGS) -L$(FASTJETLIBPATH) -L$(FJCONTRIBLIBPATH) + libRivetAnalysisTools_la_LIBS = $(FASTJETLIBADD) diff --git a/var/spack/repos/builtin/packages/rivet/rivet-3.0.1.patch b/var/spack/repos/builtin/packages/rivet/rivet-3.0.1.patch new file mode 100644 index 0000000000..31bdcbc7e3 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-3.0.1.patch @@ -0,0 +1,11 @@ +--- bin/rivet-buildplugin.in.orig 2020-04-30 14:41:44.988555918 +0200 ++++ bin/rivet-buildplugin.in 2020-04-30 14:42:21.301319083 +0200 +@@ -249,7 +249,7 @@ + srcnames[$idx]="$tmpfile" + fi + done +-objnames=("${srcnames[@]/.cc/.o}") ++objnames=("${srcnames[@]/%.cc/.o}") + + if [[ -z "$debug" ]]; then silencer="@"; fi + tmpmakefile=$(mktemp Makefile.tmp.XXXXXXXXXX) diff --git a/var/spack/repos/builtin/packages/rivet/rivet-3.1.0.patch b/var/spack/repos/builtin/packages/rivet/rivet-3.1.0.patch new file mode 100644 index 0000000000..ff09f52862 --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-3.1.0.patch @@ -0,0 +1,11 @@ +--- bin/rivet-build.in.orig 2020-04-30 11:11:53.820773774 +0200 ++++ bin/rivet-build.in 2020-04-30 11:12:32.766024110 +0200 +@@ -249,7 +249,7 @@ + srcnames[$idx]="$tmpfile" + fi + done +-objnames=("${srcnames[@]/.cc/.o}") ++objnames=("${srcnames[@]/%.cc/.o}") + + if [[ -z "$debug" ]]; then silencer="@"; fi + tmpmakefile=$(mktemp Makefile.tmp.XXXXXXXXXX) diff --git a/var/spack/repos/builtin/packages/rivet/rivet-3.1.1.patch b/var/spack/repos/builtin/packages/rivet/rivet-3.1.1.patch new file mode 100644 index 0000000000..687d22819a --- /dev/null +++ b/var/spack/repos/builtin/packages/rivet/rivet-3.1.1.patch @@ -0,0 +1,11 @@ +--- configure.ac.orig 2020-05-12 11:26:03.482506197 +0200 ++++ configure.ac 2020-05-12 11:54:55.569077342 +0200 +@@ -211,7 +211,7 @@ + if test "$fjmajor" -lt 3; then + AC_MSG_ERROR([FastJet version 3.0.0 or later is required]) + fi +- FASTJETLIBADD="$($FJCONFIG --plugins --shared --libs| tr ' ' '\n' | grep -v gcc | tr '\n' ' ')" ++ FASTJETLIBADD="$($FJCONFIG --plugins --shared --libs)" + else + FASTJETLIBADD="-L$FASTJETLIBPATH -l$FASTJETLIBNAME" + FASTJETLIBADD="$FASTJETLIBADD -lSISConePlugin -lsiscone -lsiscone_spherical" diff --git a/var/spack/repos/builtin/packages/yoda/package.py b/var/spack/repos/builtin/packages/yoda/package.py new file mode 100644 index 0000000000..21ebb020d0 --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/package.py @@ -0,0 +1,84 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Yoda(AutotoolsPackage): + """YODA - Yet more Objects for Data Analysis""" + + homepage = "https://yoda.hepforge.org/" + url = "https://yoda.hepforge.org/downloads/?f=YODA-1.8.3.tar.bz2" + + version('1.8.3', sha256='d9dd0ea5e0f630cdf4893c09a40c78bd44455777c2125385ecc26fa9a2acba8a') + version('1.8.2', sha256='89558c11cf9b88b0899713e5b4bf8781fdcecc480ff155985ebbf148c6d80bdb') + version('1.8.1', sha256='51472e12065b9469f13906f0dc609e036d0c1dbd2a8e445e7d654aba73660112') + version('1.8.0', sha256='82c62bbaedb4b6b7d50cd42ce5409d453d46c1cc6724047db5efa74d34dd6dc5') + version('1.7.7', sha256='cfb64b099a79ec4d138792f0b464a8fbb04c4345143f77bbdca07acb744628ce') + version('1.7.6', sha256='864a1459c82676c991fcaed931263a415e815e3c9dc2cad2f94bda6fa4d112e5') + version('1.7.5', sha256='7b1dc7bb380d0fbadce12072f5cc21912c115e826182a3922d864e7edea131db') + version('1.7.4', sha256='3df316b89e9c0052104f8956e4f7d26c0b0b05cdace7d908be35c383361e3a71') + version('1.7.3', sha256='ebf6094733823e9cc2d1586aff06db2d8999c74a47e666baf305322f62c48058') + version('1.7.2', sha256='7f093cf947824ec118767c7c1999a50ea9343c173cf8c5062e3800ba54c2943e') + version('1.7.1', sha256='edd7971ecd272314309c800395200b07cf68547cbac3378a02d0b8c9ac03027b') + version('1.7.0', sha256='b3d6bfb0c52ed87cd240cee5e93e09102832d9ef32505d7275f4d3191a35ce3b') + version('1.6.7', sha256='2abf378573832c201bc6a9fecfff5b2006fc98c7a272540326cda8eb5bd95e16') + version('1.6.6', sha256='cf172a496d9108b93420530ea91055d07ecd514d2894d78db46b806530e91d21') + version('1.6.5', sha256='1477fe754cfe2e4e06aa363a773accf18aab960a8b899968b77834368cac14c5') + version('1.6.4', sha256='4c01f43c18b7b2e71f61dea0bb8c6fdc099c8e1a66256c510652884c4ffffbca') + version('1.6.3', sha256='1dd7e334fe54a05ff911d9e227d395abc5efd29e29d60187a036b2201f97da19') + version('1.6.2', sha256='5793cd1320694118423888801ca520f2719565fde04699ee69e1751f47cb57a8') + version('1.6.1', sha256='ec3f4cc4eb57f94fb431cc37db10eb831f025df95ffd9e516b8009199253c62b') + version('1.6.0', sha256='2920ef2588268484b650dc08438664a3539b79c65a9e80d58e3771bb699e2a6b') + version('1.5.9', sha256='1a19cc8c34c08f1797a93d355250e682eb85d62d4ab277b6714d7873b4bdde75') + version('1.5.8', sha256='011c5be5cc565f8baf02e7ebbe57a57b4d70dc6a528d5b0102700020bbf5a973') + version('1.5.7', sha256='f775df11b034154b8f5d43f12007692c3314672e60d3e554b3928fe5b0f00c29') + version('1.5.6', sha256='050e17b1b80658213281a2e4112dfecc0096f01f269cd739d601b2fd0e790a0c') + version('1.5.5', sha256='ce45df6248c6c50633953048240513dc52ca5c9144ef69ea72ada2df23bc4918') + version('1.5.4', sha256='c41853a1f3aa0794875ae09c1ba4348942eb890e798ac7cee6e3505a9b68b678') + version('1.5.3', sha256='1220ac0ae204c3ed6b22a6a35c30d9b5c1ded35a1054cff131861b4a919d4904') + version('1.5.2', sha256='ec113c53a6174b174aaea8f45802cc419184ce056123b93ab8d3f80fc1bd4986') + version('1.5.1', sha256='a8b088b3ede67d560e40f91f4f99be313f21841c46ce2f657af7692a7bbe3276') + version('1.5.0', sha256='2c2b77344854fac937a8ef07c0928c50829ff4c69bcad6e0afb92da611b7dd18') + version('1.4.0', sha256='e76a129f7c2b72b53525fe0b712606eeeab0dc145daa070ebf0728f0384eaf48') + version('1.3.1', sha256='274e196d009e3aac6dd1f2db876de9613ca1a3c21ec3364bc3662f5493bc9747') + version('1.3.0', sha256='d63197d5940b481ecb06cf4703d9c0b49388f32cad61ccae580d1b80312bd215') + version('1.2.1', sha256='e86964e91e4fbbba443d2848f55c028001de4713dcc64c40339389de053e7d8b') + version('1.2.0', sha256='143fa86cd7965d26d3897a5752307bfe08f4866c2f9a9f226a393127d19ee353') + version('1.1.0', sha256='5d2e8f3c1cddfb59fe651931c7c605fe0ed067864fa86047aed312c6a7938e01') + version('1.0.7', sha256='145c27d922c27a4e1d6d50030f4ddece5f03d6c309a5e392a5fcbb5e83e747ab') + version('1.0.6', sha256='357732448d67a593e5ff004418f2a2a263a1401ffe84e021f8a714aa183eaa21') + version('1.0.5', sha256='ba72bc3943a1b39fa63900570948199cf5ed5c7523f2c4af4740e51b098f1794') + version('1.0.4', sha256='697fe397c69689feecb2a731e19b2ff85e19343b8198c4f18a7064c4f7123950') + version('1.0.3', sha256='6a1d1d75d9d74da457726ea9463c1b0b6ba38d4b43ef54e1c33f885e70fdae4b') + + variant("root", default=False, description="Enable ROOT interface") + + depends_on('python', type=('build', 'run')) + depends_on('py-future', type=('build', 'run')) + depends_on('boost', when='@:1.6.0', type=('build', 'run')) + depends_on('py-cython', type='build') + depends_on('py-matplotlib', when='@1.3.0:', type=('build', 'run')) + depends_on('root', type=('build', 'run'), when='+root') + + patch('yoda-1.5.5.patch', level=0, when='@1.5.5') + patch('yoda-1.5.9.patch', level=0, when='@1.5.9') + patch('yoda-1.6.1.patch', level=0, when='@1.6.1') + patch('yoda-1.6.2.patch', level=0, when='@1.6.2') + patch('yoda-1.6.3.patch', level=0, when='@1.6.3') + patch('yoda-1.6.4.patch', level=0, when='@1.6.4') + patch('yoda-1.6.5.patch', level=0, when='@1.6.5') + patch('yoda-1.6.6.patch', level=0, when='@1.6.6') + patch('yoda-1.6.7.patch', level=0, when='@1.6.7') + + def configure_args(self): + args = [] + if self.spec.satisfies('@:1.6.0'): + args += '--with-boost=' + self.spec['boost'].prefix + + if '+root' in spec: + args += '--enable-root' + + return args diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.5.5.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.5.5.patch new file mode 100644 index 0000000000..ba86d4cc31 --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.5.5.patch @@ -0,0 +1,50 @@ +--- configure.orig 2016-09-30 08:52:56.000000000 +0200 ++++ configure 2016-09-30 08:56:39.000000000 +0200 +@@ -16568,11 +16568,15 @@ + cat >conftest.py <<_ACEOF + + import sys, string ++# Python 2 and 3 compatible ++from future.builtins import map ++# Python 2 and 3: forward-compatible ++from future.builtins import range + # split strings by '.' and convert to numeric. Append some zeros + # because we need at least 4 digits for the hex conversion. +-minver = map(int, string.split('2.5', '.')) + [0, 0, 0] ++minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] + minverhex = 0 +-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i] ++for i in range(0, 4): minverhex = (minverhex << 8) + minver[i] + if sys.hexversion >= minverhex: + sys.exit( 0 ) + else: +@@ -16600,15 +16604,15 @@ + fi + + +- PYTHON_VERSION=`$PYTHON -c "import sys; print '.'.join(map(str, sys.version_info[:2]));"` ++ PYTHON_VERSION=`$PYTHON -c "from __future__ import print_function; import sys; print('.'.join(list(map(str, sys.version_info[:2]))));"` + +- YODA_PYTHONPATH=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True);"` ++ YODA_PYTHONPATH=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True));"` + + ## Test for Python header + if test -x "$PYTHON"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for Python include path" >&5 + $as_echo_n "checking for Python include path... " >&6; } +- python_incpath=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_inc();"` ++ python_incpath=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_inc());"` + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $python_incpath" >&5 + $as_echo "$python_incpath" >&6; } + python_header="$python_incpath/Python.h" + --- pyext/setup.py.in.orig 2016-09-30 08:57:23.000000000 +0200 + +++ pyext/setup.py.in 2016-09-30 08:57:58.000000000 +0200 + @@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present + -if os.environ.has_key("BUILD_ROOTCOMPAT"): + +if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.5.9.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.5.9.patch new file mode 100644 index 0000000000..37a9ffab32 --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.5.9.patch @@ -0,0 +1,50 @@ +--- configure.orig 2016-09-30 09:01:00.000000000 +0200 ++++ configure 2016-09-30 09:03:05.000000000 +0200 +@@ -16574,11 +16574,15 @@ + cat >conftest.py <<_ACEOF + + import sys, string ++# Python 2 and 3 compatible ++from future.builtins import map ++# Python 2 and 3: forward-compatible ++from future.builtins import range + # split strings by '.' and convert to numeric. Append some zeros + # because we need at least 4 digits for the hex conversion. +-minver = map(int, string.split('2.5', '.')) + [0, 0, 0] ++minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] + minverhex = 0 +-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i] ++for i in range(0, 4): minverhex = (minverhex << 8) + minver[i] + if sys.hexversion >= minverhex: + sys.exit( 0 ) + else: +@@ -16606,15 +16610,15 @@ + fi + + +- PYTHON_VERSION=`$PYTHON -c "import sys; print '.'.join(map(str, sys.version_info[:2]));"` ++ PYTHON_VERSION=`$PYTHON -c "from __future__ import print_function; import sys; print('.'.join(list(map(str, sys.version_info[:2]))));"` + +- YODA_PYTHONPATH=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True);"` ++ YODA_PYTHONPATH=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True));"` + + ## Test for Python header + if test -x "$PYTHON"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for Python include path" >&5 + $as_echo_n "checking for Python include path... " >&6; } +- python_incpath=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_inc();"` ++ python_incpath=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_inc());"` + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $python_incpath" >&5 + $as_echo "$python_incpath" >&6; } + python_header="$python_incpath/Python.h" + --- pyext/setup.py.in.orig 2016-09-30 09:03:25.000000000 +0200 + +++ pyext/setup.py.in 2016-09-30 09:04:03.000000000 +0200 + @@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present + -if os.environ.has_key("BUILD_ROOTCOMPAT"): + +if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.6.1.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.6.1.patch new file mode 100644 index 0000000000..0a5996a70d --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.6.1.patch @@ -0,0 +1,72 @@ +--- bin/yoda-config.in.orig 2016-07-11 14:43:05.700511377 +0300 ++++ bin/yoda-config.in 2016-07-11 14:43:50.312499322 +0300 +@@ -59,7 +59,7 @@ + + ## "Pre-rolled" build info + tmp=$( echo "$*" | egrep -- '--\|--\|--\') +-test -n "$tmp" && OUT="$OUT -I@includedir@ @BOOST_CPPFLAGS@" ++test -n "$tmp" && OUT="$OUT -I@includedir@" + + tmp=$( echo "$*" | egrep -- '--\|--\|--\') + test -n "$tmp" && OUT="$OUT -L@libdir@ -lYODA" +--- bin/yoda-config.orig 2016-07-11 14:43:31.960503275 +0300 ++++ bin/yoda-config 2016-07-11 14:43:41.200501112 +0300 +@@ -59,7 +59,7 @@ + + ## "Pre-rolled" build info + tmp=$( echo "$*" | egrep -- '--\|--\|--\') +-test -n "$tmp" && OUT="$OUT -I${prefix}/include @BOOST_CPPFLAGS@" ++test -n "$tmp" && OUT="$OUT -I${prefix}/include" + + tmp=$( echo "$*" | egrep -- '--\|--\|--\') + test -n "$tmp" && OUT="$OUT -L${exec_prefix}/lib -lYODA" +--- configure.orig 2016-09-30 09:04:54.000000000 +0200 ++++ configure 2016-09-30 09:07:44.000000000 +0200 +@@ -16508,11 +16508,15 @@ + cat >conftest.py <<_ACEOF + + import sys, string ++# Python 2 and 3 compatible ++from future.builtins import map ++# Python 2 and 3: forward-compatible ++from future.builtins import range + # split strings by '.' and convert to numeric. Append some zeros + # because we need at least 4 digits for the hex conversion. +-minver = map(int, string.split('2.5', '.')) + [0, 0, 0] ++minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] + minverhex = 0 +-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i] ++for i in range(0, 4): minverhex = (minverhex << 8) + minver[i] + if sys.hexversion >= minverhex: + sys.exit( 0 ) + else: +@@ -16540,15 +16544,15 @@ + fi + + +- PYTHON_VERSION=`$PYTHON -c "import sys; print '.'.join(map(str, sys.version_info[:2]));"` ++ PYTHON_VERSION=`$PYTHON -c "from __future__ import print_function; import sys; print('.'.join(list(map(str, sys.version_info[:2]))));"` + +- YODA_PYTHONPATH=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True);"` ++ YODA_PYTHONPATH=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True));"` + + ## Test for Python header + if test -x "$PYTHON"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for Python include path" >&5 + $as_echo_n "checking for Python include path... " >&6; } +- python_incpath=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_inc();"` ++ python_incpath=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_inc());"` + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $python_incpath" >&5 + $as_echo "$python_incpath" >&6; } + python_header="$python_incpath/Python.h" + --- pyext/setup.py.in.orig 2016-09-30 09:07:58.000000000 +0200 + +++ pyext/setup.py.in 2016-09-30 09:08:17.000000000 +0200 + @@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present + -if os.environ.has_key("BUILD_ROOTCOMPAT"): + +if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.6.2.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.6.2.patch new file mode 100644 index 0000000000..a0eb97d0f3 --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.6.2.patch @@ -0,0 +1,22 @@ +--- bin/yoda-config.in.orig 2016-07-11 14:43:05.700511377 +0300 ++++ bin/yoda-config.in 2016-07-11 14:43:50.312499322 +0300 +@@ -59,7 +59,7 @@ + + ## "Pre-rolled" build info + tmp=$( echo "$*" | egrep -- '--\|--\|--\') +-test -n "$tmp" && OUT="$OUT -I@includedir@ @BOOST_CPPFLAGS@" ++test -n "$tmp" && OUT="$OUT -I@includedir@" + + tmp=$( echo "$*" | egrep -- '--\|--\|--\') + test -n "$tmp" && OUT="$OUT -L@libdir@ -lYODA" +--- bin/yoda-config.orig 2016-07-11 14:43:31.960503275 +0300 ++++ bin/yoda-config 2016-07-11 14:43:41.200501112 +0300 +@@ -59,7 +59,7 @@ + + ## "Pre-rolled" build info + tmp=$( echo "$*" | egrep -- '--\|--\|--\') +-test -n "$tmp" && OUT="$OUT -I${prefix}/include @BOOST_CPPFLAGS@" ++test -n "$tmp" && OUT="$OUT -I${prefix}/include" + + tmp=$( echo "$*" | egrep -- '--\|--\|--\') + test -n "$tmp" && OUT="$OUT -L${exec_prefix}/lib -lYODA" diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.6.3.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.6.3.patch new file mode 100644 index 0000000000..4d50a3cf2d --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.6.3.patch @@ -0,0 +1,50 @@ +--- configure.orig 2016-08-09 21:07:54.000000000 +0200 ++++ configure 2016-09-19 11:49:18.560986340 +0200 +@@ -16520,11 +16520,15 @@ + cat >conftest.py <<_ACEOF + + import sys, string ++# Python 2 and 3 compatible ++from future.builtins import map ++# Python 2 and 3: forward-compatible ++from future.builtins import range + # split strings by '.' and convert to numeric. Append some zeros + # because we need at least 4 digits for the hex conversion. +-minver = map(int, string.split('2.5', '.')) + [0, 0, 0] ++minver = list(map(int, '2.5'.split('.'))) + [0, 0, 0] + minverhex = 0 +-for i in xrange(0, 4): minverhex = (minverhex << 8) + minver[i] ++for i in range(0, 4): minverhex = (minverhex << 8) + minver[i] + if sys.hexversion >= minverhex: + sys.exit( 0 ) + else: +@@ -16552,15 +16556,15 @@ + fi + + +- PYTHON_VERSION=`$PYTHON -c "import sys; print '.'.join(map(str, sys.version_info[:2]));"` ++ PYTHON_VERSION=`$PYTHON -c "from __future__ import print_function; import sys; print('.'.join(list(map(str, sys.version_info[:2]))));"` + +- YODA_PYTHONPATH=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True);"` ++ YODA_PYTHONPATH=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(prefix='$prefix', plat_specific=True));"` + + ## Test for Python header + if test -x "$PYTHON"; then + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for Python include path" >&5 + $as_echo_n "checking for Python include path... " >&6; } +- python_incpath=`$PYTHON -c "import distutils.sysconfig; print distutils.sysconfig.get_python_inc();"` ++ python_incpath=`$PYTHON -c "from __future__ import print_function; import distutils.sysconfig; print(distutils.sysconfig.get_python_inc());"` + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $python_incpath" >&5 + $as_echo "$python_incpath" >&6; } + python_header="$python_incpath/Python.h" + --- pyext/setup.py.in.orig 2016-09-06 17:25:39.993785138 +0200 + +++ pyext/setup.py.in 2016-09-06 17:26:10.368489432 +0200 + @@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present + -if os.environ.has_key("BUILD_ROOTCOMPAT"): + +if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.6.4.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.6.4.patch new file mode 100644 index 0000000000..44b8ed06bc --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.6.4.patch @@ -0,0 +1,11 @@ +--- pyext/setup.py.in.orig 2016-09-30 09:13:02.000000000 +0200 ++++ pyext/setup.py.in 2016-09-30 09:13:21.000000000 +0200 +@@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present +-if os.environ.has_key("BUILD_ROOTCOMPAT"): ++if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.6.5.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.6.5.patch new file mode 100644 index 0000000000..ee632655ad --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.6.5.patch @@ -0,0 +1,23 @@ +--- bin/yoda2aida.orig 2016-10-07 13:25:57.355168158 +0200 ++++ bin/yoda2aida 2016-10-07 13:26:04.779169090 +0200 +@@ -18,7 +18,7 @@ + parser.add_option("-M", "--unmatch", dest="UNMATCH", metavar="PATT", default=None, + help="exclude histograms whose path matches this regex") + +-sys.stderr.write("WARNING: yoda2aida is DEPRECATED.\n It will die when AIDA does... *soon*\n" ++sys.stderr.write("WARNING: yoda2aida is DEPRECATED.\n It will die when AIDA does... *soon*\n") + + opts, args = parser.parse_args() + in_out = parse_x2y_args(args, ".yoda", ".aida") + +--- pyext/setup.py.in.orig 2016-09-30 09:13:02.000000000 +0200 ++++ pyext/setup.py.in 2016-09-30 09:13:21.000000000 +0200 +@@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present +-if os.environ.has_key("BUILD_ROOTCOMPAT"): ++if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.6.6.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.6.6.patch new file mode 100644 index 0000000000..fd400e4d7e --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.6.6.patch @@ -0,0 +1,11 @@ +--- pyext/setup.py.in.orig 2017-02-01 15:24:41.000000000 +0100 ++++ pyext/setup.py.in 2017-02-01 15:25:04.000000000 +0100 +@@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present +-if os.environ.has_key("BUILD_ROOTCOMPAT"): ++if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure diff --git a/var/spack/repos/builtin/packages/yoda/yoda-1.6.7.patch b/var/spack/repos/builtin/packages/yoda/yoda-1.6.7.patch new file mode 100644 index 0000000000..cc45b3e689 --- /dev/null +++ b/var/spack/repos/builtin/packages/yoda/yoda-1.6.7.patch @@ -0,0 +1,11 @@ +--- pyext/setup.py.in.orig 2017-07-17 12:13:12.057895620 +0200 ++++ pyext/setup.py.in 2017-07-17 12:15:11.991048036 +0200 +@@ -34,7 +34,7 @@ + extns = [ext("util"), ext("core", statics=static_files, depends=core_depends)] + + ## Enable building of ROOT extension if ROOT is present +-if os.environ.has_key("BUILD_ROOTCOMPAT"): ++if "BUILD_ROOTCOMPAT" in os.environ: + try: + # import ROOT + # TODO: Need to test for and use root-config in configure -- cgit v1.2.3-60-g2f50