From f38820f89c913ce142e6562829c0809ad661a59b Mon Sep 17 00:00:00 2001 From: Justin S <3630356+codeandkey@users.noreply.github.com> Date: Fri, 1 May 2020 16:40:09 -0500 Subject: tbl2asn: new package at 20200301 (#16280) * tbl2asn: new package at 20200301 * tbl2asn: remove unused url * tbl2asn: use spack decompression, fix permissions * tbl2asn: change version --- .../repos/builtin/packages/tbl2asn/package.py | 24 ++++++++++++++++++++++ 1 file changed, 24 insertions(+) create mode 100644 var/spack/repos/builtin/packages/tbl2asn/package.py (limited to 'var') diff --git a/var/spack/repos/builtin/packages/tbl2asn/package.py b/var/spack/repos/builtin/packages/tbl2asn/package.py new file mode 100644 index 0000000000..8f1c0ba74c --- /dev/null +++ b/var/spack/repos/builtin/packages/tbl2asn/package.py @@ -0,0 +1,24 @@ +# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * +from os import chmod + + +class Tbl2asn(Package): + """Tbl2asn is a command-line program that automates the creation of + sequence records for submission to GenBank.""" + + homepage = "https://www.ncbi.nlm.nih.gov/genbank/tbl2asn2/" + + version('2020-03-01', sha256='7cc1119d3cfcbbffdbd4ecf33cef8bbdd44fc5625c72976bee08b1157625377e') + + def url_for_version(self, ver): + return "https://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program/tbl2asn/linux.tbl2asn.gz" + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('../linux.tbl2asn', prefix.bin.tbl2asn) + chmod(prefix.bin.tbl2asn, 0o775) -- cgit v1.2.3-70-g09d2