# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other # Spack Project Developers. See the top-level COPYRIGHT file for details. # # SPDX-License-Identifier: (Apache-2.0 OR MIT) from spack import * class Cdo(AutotoolsPackage): """CDO is a collection of command line Operators to manipulate and analyse Climate and NWP model Data. """ homepage = 'https://code.mpimet.mpg.de/projects/cdo' url = 'https://code.mpimet.mpg.de/attachments/download/12760/cdo-1.7.2.tar.gz' list_url = 'https://code.mpimet.mpg.de/projects/cdo/files' maintainers = ['skosukhin'] version('1.9.7.1', sha256='3771952e065bcf935d43e492707370ed2a0ecb59a06bea24f9ab69d77943962c', url='https://code.mpimet.mpg.de/attachments/download/20124/cdo-1.9.7.1.tar.gz') version('1.9.6', sha256='b31474c94548d21393758caa33f35cf7f423d5dfc84562ad80a2bdcb725b5585', url='https://code.mpimet.mpg.de/attachments/download/19299/cdo-1.9.6.tar.gz') version('1.9.5', sha256='48ed65cc5b436753c8e7f9eadd8aa97376698ce230ceafed2a4350a5b1a27148', url='https://code.mpimet.mpg.de/attachments/download/18264/cdo-1.9.5.tar.gz') version('1.9.4', sha256='3d1c0fd3f7d38c5d3d88139ca1546c9d24e1b1ff752a794a4194dfe624695def', url='https://code.mpimet.mpg.de/attachments/download/17374/cdo-1.9.4.tar.gz') version('1.9.3', sha256='e83a3de7b402600c0d9a5df18073d36d133ff9719d3c561a0efa90f9c1599f3f', url='https://code.mpimet.mpg.de/attachments/download/16435/cdo-1.9.3.tar.gz') version('1.9.2', sha256='d1c5092167034a48e4b8ada24cf78a1d4b84e364ffbb08b9ca70d13f428f300c', url='https://code.mpimet.mpg.de/attachments/download/16035/cdo-1.9.2.tar.gz') version('1.9.1', sha256='33cba3cfcc27e5896769143c5f8e2f300ca14c7a40d1f19ffd1ed24b49ea3d55', url='https://code.mpimet.mpg.de/attachments/download/15653/cdo-1.9.1.tar.gz') version('1.9.0', sha256='df367f8c3abf4ab085bcfc61e0205b28a5ecc69b7b83ba398b4d3c874dd69008', url='https://code.mpimet.mpg.de/attachments/download/15187/cdo-1.9.0.tar.gz') version('1.8.2', sha256='6ca6c1263af2237737728ac937a275f8aa27680507636a6b6320f347c69a369a', url='https://code.mpimet.mpg.de/attachments/download/14686/cdo-1.8.2.tar.gz') version('1.7.2', sha256='4c43eba7a95f77457bfe0d30fb82382b3b5f2b0cf90aca6f0f0a008f6cc7e697', url='https://code.mpimet.mpg.de/attachments/download/12760/cdo-1.7.2.tar.gz') variant('netcdf', default=True, description='Enable NetCDF support') variant('grib2', default='eccodes', values=('eccodes', 'grib-api', 'none'), description='Specify GRIB2 backend') variant('external-grib1', default=False, description='Ignore the built-in support and use the external ' 'GRIB2 backend for GRIB1 files') variant('szip', default=True, description='Enable szip compression for GRIB1') variant('hdf5', default=True, description='Enable HDF5 support') variant('udunits2', default=True, description='Enable UDUNITS2 support') variant('libxml2', default=True, description='Enable libxml2 support') variant('proj', default=True, description='Enable PROJ library for cartographic projections') variant('curl', default=False, description='Enable curl support') variant('fftw3', default=True, description='Enable support for fftw3') variant('magics', default=False, description='Enable Magics library support') variant('openmp', default=True, description='Enable OpenMP support') depends_on('pkgconfig', type='build') depends_on('netcdf', when='+netcdf') # In this case CDO does not depend on hdf5 directly but we need the backend # of netcdf to be thread safe. depends_on('hdf5+threadsafe', when='+netcdf') depends_on('grib-api', when='grib2=grib-api') depends_on('eccodes', when='grib2=eccodes') depends_on('szip', when='+szip') depends_on('hdf5+threadsafe', when='+hdf5') depends_on('udunits2', when='+udunits2') depends_on('libxml2', when='+libxml2') depends_on('proj@:5', when='+proj') depends_on('curl', when='+curl') depends_on('fftw@3:', when='+fftw3') depends_on('magics', when='+magics') depends_on('libuuid') conflicts('grib2=eccodes', when='@:1.8', msg='Eccodes is supported starting version 1.9.0') conflicts('+szip', when='+external-grib1 grib2=none', msg='The configuration does not support GRIB1') conflicts('%gcc@9:', when='@:1.9.6', msg='GCC 9 changed OpenMP data sharing behavior') def configure_args(self): config_args = self.with_or_without('netcdf', activation_value='prefix') if self.spec.variants['grib2'].value == 'eccodes': config_args.append('--with-eccodes=' + self.spec['eccodes'].prefix) config_args.append('--without-grib_api') elif self.spec.variants['grib2'].value == 'grib-api': config_args.append('--with-grib_api=' + self.spec['grib-api'].prefix) if self.spec.satisfies('@1.9:'): config_args.append('--without-eccodes') else: config_args.append('--without-grib_api') if self.spec.satisfies('@1.9:'): config_args.append('--without-eccodes') if '+external-grib1' in self.spec: config_args.append('--disable-cgribex') else: config_args.append('--enable-cgribex') if '+szip' in self.spec: config_args.append('--with-szlib=' + self.spec['szip'].prefix) else: config_args.append('--without-szlib') config_args += self.with_or_without('hdf5', activation_value='prefix') config_args += self.with_or_without('udunits2', activation_value='prefix') config_args += self.with_or_without('libxml2', activation_value='prefix') config_args += self.with_or_without('proj', activation_value='prefix') config_args += self.with_or_without('curl', activation_value='prefix') config_args += self.with_or_without('magics', activation_value='prefix') config_args += self.with_or_without('fftw3') config_args += self.enable_or_disable('openmp') # Starting version 1.9.0 CDO is a C++ program but it uses the C # interface of HDF5 without the parallel features. To avoid # unnecessary dependencies on mpi's cxx library, we need to set the # following flags. This works for OpenMPI, MPICH, MVAPICH, Intel MPI, # IBM Spectrum MPI, bullx MPI, and Cray MPI. if self.spec.satisfies('@1.9:+hdf5^hdf5+mpi'): config_args.append( 'CPPFLAGS=-DOMPI_SKIP_MPICXX -DMPICH_SKIP_MPICXX') return config_args