# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack.package import *


class Corset(Package):
    """Corset is a command-line software program to go from a de novo
    transcriptome assembly to gene-level counts."""

    homepage = "https://github.com/Oshlack/Corset/wiki"
    url = "https://github.com/Oshlack/Corset/releases/download/version-1.09/corset-1.09-linux64.tar.gz"

    license("GPL-3.0-only")

    version("1.09", sha256="9c349afc5a66c43e6b73c62f5d3166dac2fd06696aa40cff648226a5d0427a59")
    version("1.06", sha256="4aff83844461cea1edfce3d89776236c300650fc02b497cc9f11eba42d161b60")

    def url_for_version(self, version):
        url = "https://github.com/Oshlack/Corset/releases/download/version-{0}/corset-{0}-linux64.tar.gz"
        return url.format(version)

    def install(self, spec, prefix):
        mkdirp(prefix.bin)
        install("corset", prefix.bin)
        install("corset_fasta_ID_changer", prefix.bin)