# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other # Spack Project Developers. See the top-level COPYRIGHT file for details. # # SPDX-License-Identifier: (Apache-2.0 OR MIT) import os import re import sys from spack.package import * class Mpich(AutotoolsPackage, CudaPackage, ROCmPackage): """MPICH is a high performance and widely portable implementation of the Message Passing Interface (MPI) standard.""" homepage = "https://www.mpich.org" url = "https://www.mpich.org/static/downloads/3.0.4/mpich-3.0.4.tar.gz" git = "https://github.com/pmodels/mpich.git" list_url = "https://www.mpich.org/static/downloads/" list_depth = 1 maintainers = ["raffenet", "yfguo"] tags = ["e4s"] executables = ["^mpichversion$"] version("develop", submodules=True) version("4.0.2", sha256="5a42f1a889d4a2d996c26e48cbf9c595cbf4316c6814f7c181e3320d21dedd42") version("4.0.1", sha256="66a1fe8052734af2eb52f47808c4dfef4010ceac461cb93c42b99acfb1a43687") version("4.0", sha256="df7419c96e2a943959f7ff4dc87e606844e736e30135716971aba58524fbff64") version("3.4.3", sha256="8154d89f3051903181018166678018155f4c2b6f04a9bb6fe9515656452c4fd7") version("3.4.2", sha256="5c19bea8b84e8d74cca5f047e82b147ff3fba096144270e3911ad623d6c587bf") version("3.4.1", sha256="8836939804ef6d492bcee7d54abafd6477d2beca247157d92688654d13779727") version("3.4", sha256="ce5e238f0c3c13ab94a64936060cff9964225e3af99df1ea11b130f20036c24b") version("3.3.2", sha256="4bfaf8837a54771d3e4922c84071ef80ffebddbb6971a006038d91ee7ef959b9") version("3.3.1", sha256="fe551ef29c8eea8978f679484441ed8bb1d943f6ad25b63c235d4b9243d551e5") version("3.3", sha256="329ee02fe6c3d101b6b30a7b6fb97ddf6e82b28844306771fa9dd8845108fa0b") version("3.2.1", sha256="5db53bf2edfaa2238eb6a0a5bc3d2c2ccbfbb1badd79b664a1a919d2ce2330f1") version("3.2", sha256="0778679a6b693d7b7caff37ff9d2856dc2bfc51318bf8373859bfa74253da3dc") version("3.1.4", sha256="f68b5330e94306c00ca5a1c0e8e275c7f53517d01d6c524d51ce9359d240466b") version("3.1.3", sha256="afb690aa828467721e9d9ab233fe00c68cae2b7b930d744cb5f7f3eb08c8602c") version("3.1.2", sha256="37c3ba2d3cd3f4ea239497d9d34bd57a663a34e2ea25099c2cbef118c9156587") version("3.1.1", sha256="455ccfaf4ec724d2cf5d8bff1f3d26a958ad196121e7ea26504fd3018757652d") version("3.1", sha256="fcf96dbddb504a64d33833dc455be3dda1e71c7b3df411dfcf9df066d7c32c39") version("3.0.4", sha256="cf638c85660300af48b6f776e5ecd35b5378d5905ec5d34c3da7a27da0acf0b3") variant("hwloc", default=True, description="Use external hwloc package") variant("hydra", default=True, description="Build the hydra process manager") variant("romio", default=True, description="Enable ROMIO MPI I/O implementation") variant("verbs", default=False, description="Build support for OpenFabrics verbs.") variant("slurm", default=False, description="Enable SLURM support") variant("wrapperrpath", default=True, description="Enable wrapper rpath") variant( "pmi", default="pmi", description="""PMI interface.""", values=("off", "pmi", "pmi2", "pmix", "cray"), multi=False, ) variant( "device", default="ch4", description="""Abstract Device Interface (ADI) implementation. The ch4 device is in experimental state for versions before 3.4.""", values=("ch3", "ch4"), multi=False, ) variant( "netmod", default="ofi", description="""Network module. Only single netmod builds are supported. For ch3 device configurations, this presumes the ch3:nemesis communication channel. ch3:sock is not supported by this spack package at this time.""", values=("tcp", "mxm", "ofi", "ucx"), multi=False, ) variant( "pci", default=(sys.platform != "darwin"), description="Support analyzing devices on PCI bus", ) variant( "libxml2", default=True, description="Use libxml2 for XML support instead of the custom " "minimalistic implementation", ) variant("argobots", default=False, description="Enable Argobots support") variant("fortran", default=True, description="Enable Fortran support") variant( "two_level_namespace", default=False, description="""Build shared libraries and programs built with the mpicc/mpifort/etc. compiler wrappers with '-Wl,-commons,use_dylibs' and without '-Wl,-flat_namespace'.""", ) variant( "vci", default=False, when="@4: device=ch4", description="Enable multiple VCI (virtual communication " "interface) critical sections to improve performance " "of applications that do heavy concurrent MPI" "communications. Set MPIR_CVAR_CH4_NUM_VCIS= to " "enable multiple vcis at runtime.", ) variant( "datatype-engine", default="auto", description="controls the datatype engine to use", values=("dataloop", "yaksa", "auto"), when="@3.4:", multi=False, ) depends_on("yaksa", when="@4.0: device=ch4 datatype-engine=auto") depends_on("yaksa", when="@4.0: device=ch4 datatype-engine=yaksa") depends_on("yaksa+cuda", when="+cuda ^yaksa") depends_on("yaksa+rocm", when="+rocm ^yaksa") conflicts("datatype-engine=yaksa", when="device=ch3") variant( "hcoll", default=False, description="Enable support for Mellanox HCOLL accelerated " "collective operations library", when="@3.3: device=ch4 netmod=ucx", ) depends_on("hcoll", when="+hcoll") # Todo: cuda can be a conditional variant, but it does not seem to work when # overriding the variant from CudaPackage. conflicts("+cuda", when="@:3.3") conflicts("+cuda", when="device=ch3") conflicts("+rocm", when="@:4.0") conflicts("+rocm", when="device=ch3") conflicts("+cuda", when="+rocm", msg="CUDA must be disabled to support ROCm") provides("mpi@:4.0") provides("mpi@:3.1", when="@:3.2") provides("mpi@:3.0", when="@:3.1") provides("mpi@:2.2", when="@:1.2") provides("mpi@:2.1", when="@:1.1") provides("mpi@:2.0", when="@:1.0") filter_compiler_wrappers("mpicc", "mpicxx", "mpif77", "mpif90", "mpifort", relative_root="bin") # Set correct rpath flags for Intel Fortran Compiler (%oneapi) # See https://github.com/pmodels/mpich/pull/5824 # and https://github.com/spack/spack/issues/31678 # We do not fetch the patch from the upstream repo because it cannot be applied to older # versions. with when("%oneapi"): patch("mpich-oneapi-config-rpath/step1.patch", when="@:4.0.2") patch("mpich-oneapi-config-rpath/step2.patch", when="@3.1.1:4.0.2") # Fix using an external hwloc # See https://github.com/pmodels/mpich/issues/4038 # and https://github.com/pmodels/mpich/pull/3540 # landed in v3.4b1 v3.4a3 patch( "https://github.com/pmodels/mpich/commit/8a851b317ee57366cd15f4f28842063d8eff4483.patch?full_index=1", sha256="d2dafc020941d2d8cab82bc1047e4a6a6d97736b62b06e2831d536de1ac01fd0", when="@3.3:3.3.99 +hwloc", ) # fix MPI_Barrier segmentation fault # see https://lists.mpich.org/pipermail/discuss/2016-May/004764.html # and https://lists.mpich.org/pipermail/discuss/2016-June/004768.html patch("mpich32_clang.patch", when="@3.2:3.2.0%clang") patch("mpich32_clang.patch", when="@3.2:3.2.0%apple-clang") # Fix SLURM node list parsing # See https://github.com/pmodels/mpich/issues/3572 # and https://github.com/pmodels/mpich/pull/3578 # Even though there is no version 3.3.0, we need to specify 3.3:3.3.0 in # the when clause, otherwise the patch will be applied to 3.3.1, too. patch( "https://github.com/pmodels/mpich/commit/b324d2de860a7a2848dc38aefb8c7627a72d2003.patch?full_index=1", sha256="5f48d2dd8cc9f681cf710b864f0d9b00c599f573a75b1e1391de0a3d697eba2d", when="@3.3:3.3.0", ) # Fix reduce operations for unsigned integers # See https://github.com/pmodels/mpich/issues/6083 patch( "https://github.com/pmodels/mpich/commit/3a1f618e017547c9710ab4fb01ae258a01477190.patch?full_index=1", sha256="d4c0e99a80f6cb0cb0ced91f6ad5da776c4a70f70f805f08096939ec9a92483e", when="@4.0:4.0.2", ) depends_on("findutils", type="build") depends_on("pkgconfig", type="build") depends_on("hwloc@2.0.0:", when="@3.3: +hwloc") depends_on("libfabric", when="netmod=ofi") depends_on("libfabric fabrics=gni", when="netmod=ofi pmi=cray") # The ch3 ofi netmod results in crashes with libfabric 1.7 # See https://github.com/pmodels/mpich/issues/3665 depends_on("libfabric@:1.6", when="device=ch3 netmod=ofi") depends_on("libfabric@1.5:", when="@3.4: device=ch4 netmod=ofi") depends_on("ucx", when="netmod=ucx") depends_on("mxm", when="netmod=mxm") # The dependencies on libpciaccess and libxml2 come from the embedded # hwloc, which, before version 3.3, was used only for Hydra. depends_on("libpciaccess", when="@:3.2+hydra+pci") depends_on("libxml2", when="@:3.2+hydra+libxml2") # Starting with version 3.3, MPICH uses hwloc directly. depends_on("libpciaccess", when="@3.3:+pci") depends_on("libxml2", when="@3.3:+libxml2") # Starting with version 3.3, Hydra can use libslurm for nodelist parsing depends_on("slurm", when="+slurm") depends_on("pmix", when="pmi=pmix") # +argobots variant requires Argobots depends_on("argobots", when="+argobots") # building from git requires regenerating autotools files depends_on("automake@1.15:", when="@develop", type="build") depends_on("libtool@2.4.4:", when="@develop", type="build") depends_on("m4", when="@develop", type="build"), depends_on("autoconf@2.67:", when="@develop", type="build") # building with "+hwloc' also requires regenerating autotools files depends_on("automake@1.15:", when="@3.3:3.3.99 +hwloc", type="build") depends_on("libtool@2.4.4:", when="@3.3:3.3.99 +hwloc", type="build") depends_on("m4", when="@3.3:3.3.99 +hwloc", type="build"), depends_on("autoconf@2.67:", when="@3.3:3.3.99 +hwloc", type="build") # MPICH's Yaksa submodule requires python to configure depends_on("python@3.0:", when="@develop", type="build") depends_on("cray-pmi", when="pmi=cray") conflicts("device=ch4", when="@:3.2") conflicts("netmod=ofi", when="@:3.1.4") conflicts("netmod=ucx", when="device=ch3") conflicts("netmod=mxm", when="device=ch4") conflicts("netmod=mxm", when="@:3.1.3") conflicts("netmod=tcp", when="device=ch4") conflicts("pmi=pmi2", when="device=ch3 netmod=ofi") conflicts("pmi=pmix", when="device=ch3") conflicts("pmi=pmix", when="+hydra") conflicts("pmi=cray", when="+hydra") # MPICH does not require libxml2 and libpciaccess for versions before 3.3 # when ~hydra is set: prevent users from setting +libxml2 and +pci in this # case to avoid generating an identical MPICH installation. conflicts("+pci", when="@:3.2~hydra") conflicts("+libxml2", when="@:3.2~hydra") # see https://github.com/pmodels/mpich/pull/5031 conflicts("%clang@:7", when="@3.4:3.4.1") @classmethod def determine_version(cls, exe): output = Executable(exe)(output=str, error=str) match = re.search(r"MPICH Version:\s+(\S+)", output) return match.group(1) if match else None @classmethod def determine_variants(cls, exes, version): def get_spack_compiler_spec(compiler): spack_compilers = spack.compilers.find_compilers([os.path.dirname(compiler)]) actual_compiler = None # check if the compiler actually matches the one we want for spack_compiler in spack_compilers: if spack_compiler.cc and spack_compiler.cc == compiler: actual_compiler = spack_compiler break return actual_compiler.spec if actual_compiler else None def is_enabled(text): if text in set(["t", "true", "enabled", "enable", "with", "yes", "1"]): return True return False def is_disabled(text): if text in set(["f", "false", "disabled", "disable", "without", "no", "0"]): return True return False results = [] for exe in exes: variants = [] output = Executable(exe)(output=str, error=str) if re.search(r"--with-hwloc(-prefix)*=embedded", output): variants.append("~hwloc") if re.search(r"--with-pm=hydra", output): variants.append("+hydra") else: variants.append("~hydra") match = re.search(r"--(\S+)-romio", output) if match and is_enabled(match.group(1)): variants.append("+romio") elif match and is_disabled(match.group(1)): variants.append("~romio") if re.search(r"--with-ibverbs", output): variants.append("+verbs") elif re.search(r"--without-ibverbs", output): variants.append("~verbs") match = re.search(r"--enable-wrapper-rpath=(\S+)", output) if match and is_enabled(match.group(1)): variants.append("+wrapperrpath") match = re.search(r"--enable-wrapper-rpath=(\S+)", output) if match and is_disabled(match.group(1)): variants.append("~wrapperrpath") if re.search(r"--disable-fortran", output): variants.append("~fortran") match = re.search(r"--with-slurm=(\S+)", output) if match and is_enabled(match.group(1)): variants.append("+slurm") if re.search(r"--enable-libxml2", output): variants.append("+libxml2") elif re.search(r"--disable-libxml2", output): variants.append("~libxml2") if re.search(r"--with-thread-package=argobots", output): variants.append("+argobots") if re.search(r"--with-pmi=no", output): variants.append("pmi=off") elif re.search(r"--with-pmi=simple", output): variants.append("pmi=pmi") elif re.search(r"--with-pmi=pmi2/simple", output): variants.append("pmi=pmi2") elif re.search(r"--with-pmix", output): variants.append("pmi=pmix") match = re.search(r"MPICH Device:\s+(ch3|ch4)", output) if match: variants.append("device=" + match.group(1)) match = re.search(r"--with-device=ch.\S+(ucx|ofi|mxm|tcp)", output) if match: variants.append("netmod=" + match.group(1)) if re.search(r"--with-hcoll", output): variants += "+hcoll" match = re.search(r"MPICH CC:\s+(\S+)", output) if match: compiler = match.group(1) compiler_spec = get_spack_compiler_spec(compiler) if compiler_spec: variants.append("%" + str(compiler_spec)) results.append(" ".join(variants)) return results def setup_build_environment(self, env): env.unset("F90") env.unset("F90FLAGS") # https://bugzilla.redhat.com/show_bug.cgi?id=1795817 if self.spec.satisfies("%gcc@10:"): env.set("FFLAGS", "-fallow-argument-mismatch") env.set("FCFLAGS", "-fallow-argument-mismatch") # Same fix but for macOS - avoids issue #17934 if self.spec.satisfies("%apple-clang@11:"): env.set("FFLAGS", "-fallow-argument-mismatch") env.set("FCFLAGS", "-fallow-argument-mismatch") if self.spec.satisfies("%clang@11:"): env.set("FFLAGS", "-fallow-argument-mismatch") env.set("FCFLAGS", "-fallow-argument-mismatch") if "pmi=cray" in self.spec: env.set("CRAY_PMI_INCLUDE_OPTS", "-I" + self.spec["cray-pmi"].headers.directories[0]) env.set("CRAY_PMI_POST_LINK_OPTS", "-L" + self.spec["cray-pmi"].libs.directories[0]) def setup_run_environment(self, env): # Because MPI implementations provide compilers, they have to add to # their run environments the code to make the compilers available. # For Cray MPIs, the regular compiler wrappers *are* the MPI wrappers. # Cray MPIs always have cray in the module name, e.g. "cray-mpich" if self.spec.satisfies("platform=cray"): # This is intended to support external MPICH instances registered # by Spack on Cray machines prior to a879c87; users defining an # external MPICH entry for Cray should generally refer to the # "cray-mpich" package env.set("MPICC", spack_cc) env.set("MPICXX", spack_cxx) env.set("MPIF77", spack_fc) env.set("MPIF90", spack_fc) else: env.set("MPICC", join_path(self.prefix.bin, "mpicc")) env.set("MPICXX", join_path(self.prefix.bin, "mpic++")) env.set("MPIF77", join_path(self.prefix.bin, "mpif77")) env.set("MPIF90", join_path(self.prefix.bin, "mpif90")) def setup_dependent_build_environment(self, env, dependent_spec): self.setup_run_environment(env) env.set("MPICH_CC", spack_cc) env.set("MPICH_CXX", spack_cxx) env.set("MPICH_F77", spack_f77) env.set("MPICH_F90", spack_fc) env.set("MPICH_FC", spack_fc) def setup_dependent_package(self, module, dependent_spec): spec = self.spec # For Cray MPIs, the regular compiler wrappers *are* the MPI wrappers. # Cray MPIs always have cray in the module name, e.g. "cray-mpich" if self.spec.satisfies("platform=cray"): spec.mpicc = spack_cc spec.mpicxx = spack_cxx spec.mpifc = spack_fc spec.mpif77 = spack_f77 else: spec.mpicc = join_path(self.prefix.bin, "mpicc") spec.mpicxx = join_path(self.prefix.bin, "mpic++") if "+fortran" in spec: spec.mpifc = join_path(self.prefix.bin, "mpif90") spec.mpif77 = join_path(self.prefix.bin, "mpif77") spec.mpicxx_shared_libs = [ join_path(self.prefix.lib, "libmpicxx.{0}".format(dso_suffix)), join_path(self.prefix.lib, "libmpi.{0}".format(dso_suffix)), ] def autoreconf(self, spec, prefix): """Not needed usually, configure should be already there""" # If configure exists nothing needs to be done if os.path.exists(self.configure_abs_path) and not spec.satisfies("@3.3:3.3.99 +hwloc"): return # Else bootstrap with autotools bash = which("bash") bash("./autogen.sh") @run_before("autoreconf") def die_without_fortran(self): # Until we can pass variants such as +fortran through virtual # dependencies depends_on('mpi'), require Fortran compiler to # avoid delayed build errors in dependents. # The user can work around this by disabling Fortran explicitly # with ~fortran f77 = self.compiler.f77 fc = self.compiler.fc fortran_missing = f77 is None or fc is None if "+fortran" in self.spec and fortran_missing: raise InstallError( "mpich +fortran requires Fortran compilers. Configure " "Fortran compiler or disable Fortran support with ~fortran" ) def configure_args(self): spec = self.spec config_args = [ "--disable-silent-rules", "--enable-shared", "--with-pm={0}".format("hydra" if "+hydra" in spec else "no"), "--{0}-romio".format("enable" if "+romio" in spec else "disable"), "--{0}-ibverbs".format("with" if "+verbs" in spec else "without"), "--enable-wrapper-rpath={0}".format("no" if "~wrapperrpath" in spec else "yes"), "--with-yaksa={0}".format(spec["yaksa"].prefix if "^yaksa" in spec else "embedded"), ] # hwloc configure option changed in 4.0 if spec.satisfies("@4.0:"): config_args.append( "--with-hwloc={0}".format(spec["hwloc"].prefix if "^hwloc" in spec else "embedded") ) else: config_args.append( "--with-hwloc-prefix={0}".format( spec["hwloc"].prefix if "^hwloc" in spec else "embedded" ) ) if "~fortran" in spec: config_args.append("--disable-fortran") if "+slurm" in spec: config_args.append("--with-slurm=yes") config_args.append("--with-slurm-include={0}".format(spec["slurm"].prefix.include)) config_args.append("--with-slurm-lib={0}".format(spec["slurm"].prefix.lib)) else: config_args.append("--with-slurm=no") if "pmi=off" in spec: config_args.append("--with-pmi=no") elif "pmi=pmi" in spec: config_args.append("--with-pmi=simple") elif "pmi=pmi2" in spec: config_args.append("--with-pmi=pmi2/simple") elif "pmi=pmix" in spec: config_args.append("--with-pmix={0}".format(spec["pmix"].prefix)) elif "pmi=cray" in spec: config_args.append("--with-pmi=cray") if "+cuda" in spec: config_args.append("--with-cuda={0}".format(spec["cuda"].prefix)) elif not spec.satisfies("@3.4:3.4.3"): # Versions from 3.4 to 3.4.3 cannot handle --without-cuda # (see https://github.com/pmodels/mpich/pull/5060): config_args.append("--without-cuda") if "+rocm" in spec: config_args.append("--with-hip={0}".format(spec["hip"].prefix)) else: config_args.append("--without-hip") # setup device configuration device_config = "" if "device=ch4" in spec: device_config = "--with-device=ch4:" elif "device=ch3" in spec: device_config = "--with-device=ch3:nemesis:" if "netmod=ucx" in spec: device_config += "ucx" elif "netmod=ofi" in spec: device_config += "ofi" elif "netmod=mxm" in spec: device_config += "mxm" elif "netmod=tcp" in spec: device_config += "tcp" config_args.append(device_config) # Specify libfabric or ucx path explicitly, otherwise # configure might fall back to an embedded version. if "netmod=ofi" in spec: config_args.append("--with-libfabric={0}".format(spec["libfabric"].prefix)) if "netmod=ucx" in spec: config_args.append("--with-ucx={0}".format(spec["ucx"].prefix)) # In other cases the argument is redundant. if "@:3.2+hydra" in spec or "@3.3:" in spec: # The root configure script passes the argument to the configure # scripts of all instances of hwloc (there are three copies of it: # for hydra, for hydra2, and for MPICH itself). config_args += self.enable_or_disable("libxml2") # If +argobots specified, add argobots option if "+argobots" in spec: config_args.append("--with-thread-package=argobots") config_args.append("--with-argobots=" + spec["argobots"].prefix) if "+two_level_namespace" in spec: config_args.append("--enable-two-level-namespace") if "+vci" in spec: config_args.append("--enable-thread-cs=per-vci") config_args.append("--with-ch4-max-vcis=default") if "datatype-engine=yaksa" in spec: config_args.append("--with-datatype-engine=yaksa") elif "datatype-engine=dataloop" in spec: config_args.append("--with-datatype-engine=dataloop") elif "datatype-engine=auto" in spec: config_args.append("--with-datatye-engine=auto") if "+hcoll" in spec: config_args.append("--with-hcoll=" + spec["hcoll"].prefix) return config_args @run_after("install") def cache_test_sources(self): """Copy the example source files after the package is installed to an install test subdirectory for use during `spack test run`.""" self.cache_extra_test_sources(["examples", join_path("test", "mpi")]) def run_mpich_test(self, example_dir, exe): """Run stand alone tests""" test_dir = join_path(self.test_suite.current_test_cache_dir, example_dir) exe_source = join_path(test_dir, "{0}.c".format(exe)) if not os.path.isfile(exe_source): print("Skipping {0} test".format(exe)) return self.run_test( self.prefix.bin.mpicc, options=[exe_source, "-Wall", "-g", "-o", exe], purpose="test: generate {0} file".format(exe), work_dir=test_dir, ) self.run_test(exe, purpose="test: run {0} example".format(exe), work_dir=test_dir) def test(self): self.run_mpich_test(join_path("test", "mpi", "init"), "finalized") self.run_mpich_test(join_path("test", "mpi", "basic"), "sendrecv") self.run_mpich_test(join_path("test", "mpi", "perf"), "manyrma") self.run_mpich_test("examples", "cpi")