# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack.package import *


class Pbmpi(MakefilePackage):
    """A Bayesian software for phylogenetic reconstruction using mixture models"""

    homepage = "https://megasun.bch.umontreal.ca/People/lartillot/www/index.htm"
    git = "https://github.com/bayesiancook/pbmpi.git"

    version("partition", branch="partition")

    depends_on("mpi")
    depends_on("libfabric")

    build_directory = "sources"

    @run_before("build")
    def make_data_dir(self):
        mkdirp(self.stage.source_path, "data")

    def install(self, spec, prefix):
        install_tree("data", prefix.bin)
        install_tree("sources", prefix.sources)