# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack.package import *


class PyMxfold2(PythonPackage):
    """MXfold2: RNA secondary structure prediction using deep
    learning with thermodynamic integration"""

    homepage = "https://github.com/keio-bioinformatics/mxfold2"
    url      = "https://github.com/keio-bioinformatics/mxfold2/releases/download/v0.1.1/mxfold2-0.1.1.tar.gz"

    maintainers = ['dorton21']

    version('0.1.1', sha256='9f39c6ff4138212d1ad2639005f5c05ffb4df0f7e22f5e7ad49466a05aa047e5')

    depends_on('python@3.7:', type=('build', 'run'))
    depends_on('py-torch@1.7:~valgrind', type=('build', 'run'))
    depends_on('py-torchvision', type=('build', 'run'))
    depends_on('py-wheel@0.35.1:0.36.0', type=('build', 'run'))
    depends_on('py-setuptools', type='build')
    depends_on('py-setuptools-cpp', type='build')
    depends_on('cmake', type='build')