# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other # Spack Project Developers. See the top-level COPYRIGHT file for details. # # SPDX-License-Identifier: (Apache-2.0 OR MIT) from spack import * class PyPynio(PythonPackage): """PyNIO ("pie-nee-oh") is a Python module that allows read and/or write access to a variety of scientific data formats popular in climate and weather""" homepage = "https://www.pyngl.ucar.edu/Nio.shtml" url = "https://github.com/NCAR/pynio/archive/1.5.4.tar.gz" version('1.5.4', sha256='e5bb57d902740d25e4781a9f89e888149f55f2ffe60f9a5ad71069f017c89e1a') variant('hdf5', default=False, description='Include HDF5 support') variant('gdal', default=False, description='Include GDAL support') # The setup.py claims it requires these abolutely. depends_on('libpng') depends_on('jpeg') depends_on('zlib') # Spack does not currently have netcdf below 4.x, and 3.x is a # fundamentally different format. So, currently this is only providing # support for netcdf4. depends_on('netcdf-c@3.6.0:') # Turning on the hdf (i.e. hdf4) dependency causes it not to build, with # compile errors that (weirdly) relate to the declarations of HDF5. # Very odd, so I have put it in as a comment, for some brave soul to take # on later. # depends_on('hdf', when='+hdf4') # This one works, though. depends_on('hdf5', when='+hdf5') # Turning on the GDAL dependency apparently forces it to link with # -ljasper, meaning that really it depends on gdal+jasper. In my view # it should not need this unless one were specifically using PyNio to # use GDAL to read JPEG-2000 files, but it seems to be hard-wired # in PyNio's setup.py. depends_on('gdal+jasper', when='+gdal') # I have left off a few other optional dependencies, as they are not yet # in Spack. HDFEOS, HDFEOS5, GRIB. See the pynio setup.py for details. depends_on('py-numpy', type=('build', 'run')) def setup_build_environment(self, env): """ These environment variables are how the setup.py knows which options to turn on, and how to find them. """ env.set('F2CLIBS', 'gfortran') env.set('HAS_NETCDF4', '1') env.set('NETCDF4_PREFIX', self.spec['netcdf-c'].prefix) if '+hdf5' in self.spec: env.set('HAS_HDF5', '1') env.set('HDF5_PREFIX', self.spec['hdf5'].prefix) if '+gdal' in self.spec: env.set('HAS_GDAL', '1') env.set('GDAL_PREFIX', self.spec['gdal'].prefix) # This one is trouble - see comments above. # if '+hdf4' in self.spec: # env.set('HAS_HDF4', '1') # env.set('HDF4_PREFIX', self.spec['hdf'].prefix)