# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other # Spack Project Developers. See the top-level COPYRIGHT file for details. # # SPDX-License-Identifier: (Apache-2.0 OR MIT) import os import sys from spack import * from spack.operating_systems.mac_os import macos_version from spack.pkg.builtin.kokkos import Kokkos # Trilinos is complicated to build, as an inspiration a couple of links to # other repositories which build it: # https://github.com/hpcugent/easybuild-easyblocks/blob/master/easybuild/easyblocks/t/trilinos.py#L111 # https://github.com/koecher/candi/blob/master/deal.II-toolchain/packages/trilinos.package # https://gitlab.com/configurations/cluster-config/blob/master/trilinos.sh # https://github.com/Homebrew/homebrew-science/blob/master/trilinos.rb and some # relevant documentation/examples: # https://github.com/trilinos/Trilinos/issues/175 class Trilinos(CMakePackage, CudaPackage): """The Trilinos Project is an effort to develop algorithms and enabling technologies within an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. A unique design feature of Trilinos is its focus on packages. """ homepage = "https://trilinos.org/" url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-12-12-1.tar.gz" git = "https://github.com/trilinos/Trilinos.git" maintainers = ['keitat', 'sethrj', 'kuberry'] # ###################### Versions ########################## version('master', branch='master') version('13.0.1', commit='4796b92fb0644ba8c531dd9953e7a4878b05c62d') # tag trilinos-release-13-0-1 version('13.0.0', commit='9fec35276d846a667bc668ff4cbdfd8be0dfea08') # tag trilinos-release-13-0-0 version('12.18.1', commit='55a75997332636a28afc9db1aee4ae46fe8d93e7') # tag trilinos-release-12-8-1 version('12.14.1', sha256='52a4406cca2241f5eea8e166c2950471dd9478ad6741cbb2a7fc8225814616f0') version('12.12.1', sha256='5474c5329c6309224a7e1726cf6f0d855025b2042959e4e2be2748bd6bb49e18') version('12.10.1', sha256='ab81d917196ffbc21c4927d42df079dd94c83c1a08bda43fef2dd34d0c1a5512') version('12.8.1', sha256='d20fe60e31e3ba1ef36edecd88226240a518f50a4d6edcc195b88ee9dda5b4a1') version('12.6.4', sha256='1c7104ba60ee8cc4ec0458a1c4f6a26130616bae7580a7b15f2771a955818b73') version('12.6.3', sha256='4d28298bb4074eef522db6cd1626f1a934e3d80f292caf669b8846c0a458fe81') version('12.6.2', sha256='8be7e3e1166cc05aea7f856cc8033182e8114aeb8f87184cb38873bfb2061779') version('12.6.1', sha256='4b38ede471bed0036dcb81a116fba8194f7bf1a9330da4e29c3eb507d2db18db') version('12.4.2', sha256='fd2c12e87a7cedc058bcb8357107ffa2474997aa7b17b8e37225a1f7c32e6f0e') version('12.2.1', sha256='088f303e0dc00fb4072b895c6ecb4e2a3ad9a2687b9c62153de05832cf242098') version('12.0.1', sha256='eee7c19ca108538fa1c77a6651b084e06f59d7c3307dae77144136639ab55980') version('11.14.3', sha256='e37fa5f69103576c89300e14d43ba77ad75998a54731008b25890d39892e6e60') version('11.14.2', sha256='f22b2b0df7b88e28b992e19044ba72b845292b93cbbb3a948488199647381119') version('11.14.1', sha256='f10fc0a496bf49427eb6871c80816d6e26822a39177d850cc62cf1484e4eec07') # ###################### Variants ########################## # Other # not everyone has py-numpy activated, keep it disabled by default to avoid # configure errors # Build options variant('complex', default=False, description='Enable complex numbers in Trilinos') variant('explicit_template_instantiation', default=True, description='Enable explicit template instantiation (ETI)') variant('float', default=False, description='Enable single precision (float) numbers in Trilinos') variant('gotype', default='long', values=('int', 'long', 'long_long', 'all'), multi=False, description='global ordinal type for Tpetra') variant('fortran', default=True, description='Compile with Fortran support') variant('python', default=False, description='Build PyTrilinos wrappers') variant('wrapper', default=False, description="Use nvcc-wrapper for CUDA build") variant('cuda_rdc', default=False, description='turn on RDC for CUDA build') variant('cxxstd', default='11', values=['11', '14', '17'], multi=False) variant('openmp', default=False, description='Enable OpenMP') variant('shared', default=True, description='Enables the build of shared libraries') variant('debug', default=False, description='Enable runtime safety and debug checks') # TPLs (alphabet order) variant('boost', default=False, description='Compile with Boost') variant('cgns', default=False, description='Enable CGNS') variant('adios2', default=False, description='Enable ADIOS2') variant('hdf5', default=False, description='Compile with HDF5') variant('hypre', default=False, description='Compile with Hypre preconditioner') variant('matio', default=False, description='Compile with Matio') variant('mpi', default=True, description='Compile with MPI parallelism') variant('mumps', default=False, description='Compile with support for MUMPS solvers') variant('netcdf', default=False, description='Compile with netcdf') variant('pnetcdf', default=False, description='Compile with parallel-netcdf') variant('suite-sparse', default=False, description='Compile with SuiteSparse solvers') variant('superlu-dist', default=False, description='Compile with SuperluDist solvers') variant('superlu', default=False, description='Compile with SuperLU solvers') variant('strumpack', default=False, description='Compile with STRUMPACK solvers') variant('zlib', default=False, description='Compile with zlib') # Package options (alphabet order) variant('amesos', default=True, description='Compile with Amesos') variant('amesos2', default=True, description='Compile with Amesos2') variant('anasazi', default=True, description='Compile with Anasazi') variant('aztec', default=True, description='Compile with Aztec') variant('belos', default=True, description='Compile with Belos') # chaco is disabled by default. As of 12.14.1 libchaco.so # has the global symbol divide (and maybe others) that can # lead to symbol clash. variant('chaco', default=False, description='Compile with Chaco from SEACAS') variant('epetra', default=True, description='Compile with Epetra') variant('epetraext', default=True, description='Compile with EpetraExt') # Disable Exodus by default as it requires netcdf variant('exodus', default=False, description='Compile with Exodus from SEACAS') variant('ifpack', default=True, description='Compile with Ifpack') variant('ifpack2', default=True, description='Compile with Ifpack2') variant('intrepid', default=False, description='Enable Intrepid') variant('intrepid2', default=False, description='Enable Intrepid2') variant('isorropia', default=False, description='Compile with Isorropia') variant('kokkos', default=True, description='Compile with Kokkos') variant('ml', default=True, description='Compile with ML') variant('minitensor', default=False, description='Compile with MiniTensor') variant('muelu', default=True, description='Compile with Muelu') variant('nox', default=False, description='Compile with NOX') variant('piro', default=False, description='Compile with Piro') variant('phalanx', default=False, description='Compile with Phalanx') variant('rol', default=False, description='Compile with ROL') variant('rythmos', default=False, description='Compile with Rythmos') variant('sacado', default=True, description='Compile with Sacado') variant('stk', default=False, description='Compile with STK') variant('shards', default=False, description='Compile with Shards') variant('shylu', default=False, description='Compile with ShyLU') variant('stokhos', default=False, description='Compile with Stokhos') variant('stratimikos', default=False, description='Compile with Stratimikos') variant('teko', default=False, description='Compile with Teko') variant('tempus', default=False, description='Compile with Tempus') variant('tpetra', default=True, description='Compile with Tpetra') variant('trilinoscouplings', default=False, description='Compile with TrilinosCouplings') variant('zoltan', default=False, description='Compile with Zoltan') variant('zoltan2', default=False, description='Compile with Zoltan2') # Internal package options (alphabetical order) variant('basker', default=False, description='Compile with the Basker solver in Amesos2') variant('epetraextbtf', default=False, description='Compile with BTF in EpetraExt') variant('epetraextexperimental', default=False, description='Compile with experimental in EpetraExt') variant('epetraextgraphreorderings', default=False, description='Compile with graph reorderings in EpetraExt') # External package options variant('dtk', default=False, description='Enable DataTransferKit (deprecated)') variant('scorec', default=False, description='Enable SCOREC') variant('mesquite', default=False, description='Enable Mesquite (deprecated)') resource(name='dtk', git='https://github.com/ornl-cees/DataTransferKit.git', commit='4fe4d9d56cfd4f8a61f392b81d8efd0e389ee764', # branch dtk-3.0 placement='DataTransferKit', when='+dtk @12.14.0:12.14.99') resource(name='dtk', git='https://github.com/ornl-cees/DataTransferKit.git', commit='edfa050cd46e2274ab0a0b7558caca0079c2e4ca', # tag 3.1-rc1 placement='DataTransferKit', submodules=True, when='+dtk @12.18:12.18.99') resource(name='dtk', git='https://github.com/ornl-cees/DataTransferKit.git', branch='master', placement='DataTransferKit', submodules=True, when='+dtk @master') resource(name='scorec', git='https://github.com/SCOREC/core.git', commit='73c16eae073b179e45ec625a5abe4915bc589af2', # tag v2.2.5 placement='SCOREC', when='+scorec') resource(name='mesquite', url='https://github.com/trilinos/mesquite/archive/trilinos-release-12-12-1.tar.gz', sha256='e0d09b0939dbd461822477449dca611417316e8e8d8268fd795debb068edcbb5', placement='packages/mesquite', when='+mesquite @12.12.1:12.16.99') resource(name='mesquite', git='https://github.com/trilinos/mesquite.git', commit='20a679679b5cdf15bf573d66c5dc2b016e8b9ca1', # branch trilinos-release-12-12-1 placement='packages/mesquite', when='+mesquite @12.18.1:12.18.99') resource(name='mesquite', git='https://github.com/trilinos/mesquite.git', tag='develop', placement='packages/mesquite', when='+mesquite @master') # ###################### Conflicts ########################## # Epetra packages with when('~epetra'): conflicts('+amesos') conflicts('+aztec') conflicts('+epetraext') conflicts('+ifpack') conflicts('+isorropia') with when('~epetraext'): conflicts('+isorropia') conflicts('+teko') conflicts('+epetraextbtf') conflicts('+epetraextexperimental') conflicts('+epetraextgraphreorderings') conflicts('+teko', when='~amesos') conflicts('+teko', when='~anasazi') conflicts('+teko', when='~aztec') conflicts('+teko', when='~ifpack') conflicts('+teko', when='~ml') # Tpetra packages with when('~kokkos'): conflicts('+cuda') conflicts('+tpetra') conflicts('+intrepid2') conflicts('+phalanx') with when('~tpetra'): conflicts('+amesos2') conflicts('+dtk') conflicts('+ifpack2') conflicts('+teko') conflicts('+zoltan2') conflicts('+basker', when='~amesos2') conflicts('+exodus', when='~netcdf') conflicts('+ifpack2', when='~belos') conflicts('+intrepid', when='~sacado') conflicts('+intrepid', when='~shards') conflicts('+intrepid2', when='~shards') conflicts('+isorropia', when='~zoltan') conflicts('+phalanx', when='~sacado') conflicts('+teko', when='~stratimikos') conflicts('+teko', when='@:12 gotype=long') conflicts('+tempus', when='~nox') conflicts('+zoltan2', when='~zoltan') # Only allow DTK with Trilinos 12 conflicts('+dtk', when='~boost') conflicts('+dtk', when='~intrepid2') conflicts('+dtk', when='@:12.12.99,develop,master') # Only allow Mesquite with Trilinos 12.12 and up, and master conflicts('+mesquite', when='@:12.10.99,master') # Can only use one type of SuperLU conflicts('+superlu-dist', when='+superlu') # For Trilinos v11 we need to force SuperLUDist=OFF, since only the # deprecated SuperLUDist v3.3 together with an Amesos patch is working. conflicts('+superlu-dist', when='@11.4.1:11.14.3') # see https://github.com/trilinos/Trilinos/issues/3566 conflicts('+superlu-dist', when='+float+amesos2+explicit_template_instantiation^superlu-dist@5.3.0:') # Amesos, conflicting types of double and complex SLU_D # see # https://trilinos.org/pipermail/trilinos-users/2015-March/004731.html # and # https://trilinos.org/pipermail/trilinos-users/2015-March/004802.html conflicts('+superlu-dist', when='+complex+amesos2') conflicts('+strumpack', when='@:13.0.99') # PnetCDF was only added after v12.10.1 conflicts('+pnetcdf', when='@0:12.10.1') # https://github.com/trilinos/Trilinos/issues/2994 conflicts( '+shared', when='+stk platform=darwin', msg='Cannot build Trilinos with STK as a shared library on Darwin.' ) conflicts('+adios2', when='@:12.14.1') conflicts('+pnetcdf', when='~netcdf') conflicts('+pnetcdf', when='~mpi') conflicts('+cuda_rdc', when='~cuda') conflicts('+wrapper', when='~cuda') conflicts('+wrapper', when='%clang') conflicts('cxxstd=11', when='@master') conflicts('cxxstd=11', when='+wrapper ^cuda@6.5.14') conflicts('cxxstd=14', when='+wrapper ^cuda@6.5.14:8.0.61') conflicts('cxxstd=17', when='+wrapper ^cuda@6.5.14:10.2.89') # Boost requires minitensor conflicts('~boost', when='+minitensor') # SCOREC requires shards, stk, and zoltan conflicts('+scorec', when='~mpi') conflicts('+scorec', when='~shards') conflicts('+scorec', when='~stk') conflicts('+scorec', when='~zoltan') # Multi-value gotype only applies to trilinos through 12.14 conflicts('gotype=all', when='@12.15:') # All compilers except for pgi are in conflict: for __compiler in spack.compilers.supported_compilers(): if __compiler != 'clang': conflicts('+cuda', when='~wrapper %{0}'.format(__compiler), msg='trilinos~wrapper+cuda can only be built with the ' 'Clang compiler') # ###################### Dependencies ########################## # Explicit dependency variants depends_on('adios2', when='+adios2') depends_on('blas') depends_on('boost', when='+boost') depends_on('cgns', when='+cgns') depends_on('hdf5+hl', when='+hdf5') depends_on('hdf5~mpi', when='+hdf5~mpi') depends_on('hdf5+mpi', when="+hdf5+mpi") depends_on('lapack') depends_on('matio', when='+matio') depends_on('mpi', when='+mpi') depends_on('netcdf-c+mpi+parallel-netcdf', when="+netcdf+pnetcdf@master,12.12.1:") depends_on('netcdf-c+mpi', when="+netcdf~pnetcdf+mpi") depends_on('netcdf-c', when="+netcdf") depends_on('suite-sparse', when='+suite-sparse') depends_on('zlib', when="+zlib") # Trilinos' Tribits config system is limited which makes it very tricky to # link Amesos with static MUMPS, see # https://trilinos.org/docs/dev/packages/amesos2/doc/html/classAmesos2_1_1MUMPS.html # One could work it out by getting linking flags from mpif90 --showme:link # (or alike) and adding results to -DTrilinos_EXTRA_LINK_FLAGS together # with Blas and Lapack and ScaLAPACK and Blacs and -lgfortran and it may # work at the end. But let's avoid all this by simply using shared libs depends_on('mumps@5.0:+mpi+shared+openmp', when='+mumps+openmp') depends_on('mumps@5.0:+mpi+shared~openmp', when='+mumps~openmp') depends_on('scalapack', when='+mumps') depends_on('superlu-dist', when='+superlu-dist') depends_on('superlu-dist@:4.3', when='@11.14.1:12.6.1+superlu-dist') depends_on('superlu-dist@4.4:5.3', when='@12.6.2:12.12.1+superlu-dist') depends_on('superlu-dist@5.4:6.2.0', when='@12.12.2:13.0.0+superlu-dist') depends_on('superlu-dist@6.3.0:', when='@13.0.1:+superlu-dist') depends_on('superlu-dist@develop', when='@master+superlu-dist') depends_on('superlu+pic@4.3', when='+superlu') depends_on('strumpack+shared', when='+strumpack') depends_on('scalapack', when='+strumpack+mpi') # Trilinos can not be built against 64bit int hypre depends_on('hypre~internal-superlu~int64', when='+hypre') depends_on('hypre@develop~internal-superlu', when='@master+hypre') depends_on('python', when='+python') depends_on('py-mpi4py', when='+mpi +python', type=('build', 'run')) depends_on('py-numpy', when='+python', type=('build', 'run')) depends_on('swig', when='+python') depends_on('kokkos-nvcc-wrapper', when='+wrapper') depends_on('hwloc', when='@13: +kokkos') depends_on('hwloc+cuda', when='@13: +kokkos+cuda') # Variant requirements from packages depends_on('metis', when='+zoltan') depends_on('libx11', when='+exodus') depends_on('parmetis', when='+mpi +zoltan') depends_on('parmetis', when='+scorec') # ###################### Patches ########################## patch('umfpack_from_suitesparse.patch', when='@11.14.1:12.8.1') patch('xlf_seacas.patch', when='@12.10.1:12.12.1 %xl') patch('xlf_seacas.patch', when='@12.10.1:12.12.1 %xl_r') patch('xlf_seacas.patch', when='@12.10.1:12.12.1 %clang') patch('xlf_tpetra.patch', when='@12.12.1%xl') patch('xlf_tpetra.patch', when='@12.12.1%xl_r') patch('xlf_tpetra.patch', when='@12.12.1%clang') patch('fix_clang_errors_12_18_1.patch', when='@12.18.1%clang') patch('cray_secas_12_12_1.patch', when='@12.12.1%cce') patch('cray_secas.patch', when='@12.14.1:%cce') # workaround an NVCC bug with c++14 (https://github.com/trilinos/Trilinos/issues/6954) # avoid calling deprecated functions with CUDA-11 patch('fix_cxx14_cuda11.patch', when='@13.0.0:13.0.1 cxxstd=14 ^cuda@11:') # Allow building with +teko gotype=long patch('https://github.com/trilinos/Trilinos/commit/b17f20a0b91e0b9fc5b1b0af3c8a34e2a4874f3f.patch', sha256='dee6c55fe38eb7f6367e1896d6bc7483f6f9ab8fa252503050cc0c68c6340610', when='@13.0.0:13.0.1 +teko gotype=long') def flag_handler(self, name, flags): if self.spec.satisfies('%cce'): if name == 'ldflags': flags.append('-fuse-ld=gold') return (None, None, flags) return (flags, None, None) def url_for_version(self, version): url = "https://github.com/trilinos/Trilinos/archive/trilinos-release-{0}.tar.gz" return url.format(version.dashed) def setup_dependent_run_environment(self, env, dependent_spec): if '+cuda' in self.spec: # currently Trilinos doesn't perform the memory fence so # it relies on blocking CUDA kernel launch. This is needed # in case the dependent app also run a CUDA backend via Trilinos env.set('CUDA_LAUNCH_BLOCKING', '1') def setup_dependent_package(self, module, dependent_spec): if '+wrapper' in self.spec: self.spec.kokkos_cxx = self.spec["kokkos-nvcc-wrapper"].kokkos_cxx else: self.spec.kokkos_cxx = spack_cxx def setup_build_environment(self, env): spec = self.spec if '+cuda' in spec and '+wrapper' in spec: if '+mpi' in spec: env.set('OMPI_CXX', spec["kokkos-nvcc-wrapper"].kokkos_cxx) else: env.set('CXX', spec["kokkos-nvcc-wrapper"].kokkos_cxx) def cmake_args(self): spec = self.spec define = CMakePackage.define define_from_variant = self.define_from_variant def define_trilinos_enable(cmake_var, spec_var=None): if spec_var is None: spec_var = cmake_var.lower() return define_from_variant('Trilinos_ENABLE_' + cmake_var, spec_var) def define_tpl_enable(cmake_var, spec_var=None): if spec_var is None: spec_var = cmake_var.lower() return define_from_variant('TPL_ENABLE_' + cmake_var, spec_var) cxx_flags = [] options = [] # #################### Base Settings ####################### options.extend([ define('Trilinos_VERBOSE_CONFIGURE', False), define('Trilinos_ENABLE_TESTS', False), define('Trilinos_ENABLE_EXAMPLES', False), define('Trilinos_ENABLE_CXX11', True), define_from_variant("CMAKE_CXX_STANDARD", "cxxstd"), define_from_variant('BUILD_SHARED_LIBS', 'shared'), define_trilinos_enable('DEBUG', 'debug'), # The following can cause problems on systems that don't have # static libraries available for things like dl and pthreads # for example when trying to build static libs # define_from_variant('TPL_FIND_SHARED_LIBS', 'shared') # define('Trilinos_LINK_SEARCH_START_STATIC', '+shared' not in spec) ]) # MPI settings options.append(define_tpl_enable('MPI')) if '+mpi' in spec: # Force Trilinos to use the MPI wrappers instead of raw compilers # this is needed on Apple systems that require full resolution of # all symbols when linking shared libraries options.extend([ define('CMAKE_C_COMPILER', spec['mpi'].mpicc), define('CMAKE_CXX_COMPILER', spec['mpi'].mpicxx), define('CMAKE_Fortran_COMPILER', spec['mpi'].mpifc), define('MPI_BASE_DIR', spec['mpi'].prefix), ]) # ################## Trilinos Packages ##################### options.extend([ define_trilinos_enable('Amesos'), define_trilinos_enable('Amesos2'), define_trilinos_enable('Anasazi'), define_trilinos_enable('AztecOO', 'aztec'), define_trilinos_enable('Belos'), define_trilinos_enable('Epetra'), define_trilinos_enable('EpetraExt'), define_trilinos_enable('Ifpack'), define_trilinos_enable('Ifpack2'), define_trilinos_enable('Intrepid'), define_trilinos_enable('Intrepid2'), define_trilinos_enable('Isorropia'), define_trilinos_enable('Kokkos'), define_trilinos_enable('MiniTensor'), define_trilinos_enable('Mesquite'), define_trilinos_enable('ML'), define_trilinos_enable('MueLu'), define_trilinos_enable('NOX'), define_trilinos_enable('Piro'), define_trilinos_enable('Phalanx'), define_trilinos_enable('PyTrilinos', 'python'), define_trilinos_enable('ROL'), define_trilinos_enable('Rythmos'), define_trilinos_enable('Sacado'), define_trilinos_enable('SCOREC'), define_trilinos_enable('Shards'), define_trilinos_enable('ShyLU'), define_trilinos_enable('STK'), define_trilinos_enable('Stokhos'), define_trilinos_enable('Stratimikos'), define_trilinos_enable('Teko'), define_trilinos_enable('Tempus'), define_trilinos_enable('Tpetra'), define_trilinos_enable('TrilinosCouplings'), define_trilinos_enable('Zoltan'), define_trilinos_enable('Zoltan2'), define_from_variant('EpetraExt_BUILD_BTF', 'epetraextbtf'), define_from_variant('EpetraExt_BUILD_EXPERIMENTAL', 'epetraextexperimental'), define_from_variant('EpetraExt_BUILD_GRAPH_REORDERINGS', 'epetraextgraphreorderings'), define_from_variant('Amesos2_ENABLE_Basker', 'basker'), ]) if '+dtk' in spec: options.extend([ define('Trilinos_EXTRA_REPOSITORIES', 'DataTransferKit'), define('Trilinos_ENABLE_DataTransferKit', True), ]) if '+exodus' in spec: options.extend([ define('Trilinos_ENABLE_SEACAS', True), define('Trilinos_ENABLE_SEACASExodus', True), define('Trilinos_ENABLE_SEACASIoss', True), define('Trilinos_ENABLE_SEACASEpu', True), define('Trilinos_ENABLE_SEACASExodiff', True), define('Trilinos_ENABLE_SEACASNemspread', True), define('Trilinos_ENABLE_SEACASNemslice', True), ]) else: options.extend([ define('Trilinos_ENABLE_SEACASExodus', False), define('Trilinos_ENABLE_SEACASIoss', False), ]) if '+chaco' in spec: options.extend([ define('Trilinos_ENABLE_SEACAS', True), define('Trilinos_ENABLE_SEACASChaco', True), ]) else: # don't disable SEACAS, could be needed elsewhere options.extend([ define('Trilinos_ENABLE_SEACASChaco', False), define('Trilinos_ENABLE_SEACASNemslice', False) ]) if '+stratimikos' in spec: # Explicitly enable Thyra (ThyraCore is required). If you don't do # this, then you get "NOT setting ${pkg}_ENABLE_Thyra=ON since # Thyra is NOT enabled at this point!" leading to eventual build # errors if using MueLu because `Xpetra_ENABLE_Thyra` is set to # off. options.append(define('Trilinos_ENABLE_Thyra', True)) # Add thyra adapters based on package enables options.extend( define_trilinos_enable('Thyra' + pkg + 'Adapters', pkg.lower()) for pkg in ['Epetra', 'EpetraExt', 'Tpetra']) # ######################### TPLs ############################# # Enable TPLs based on whether they're in our spec, not whether they're # variant names: packages/features should disable availability tpl_dep_map = [ ('ADIOS2', 'adios2'), ('BLAS', 'blas'), ('Boost', 'boost'), ('CGNS', 'cgns'), ('HDF5', 'hdf5'), ('HYPRE', 'hypre'), ('LAPACK', 'lapack'), ('Matio', 'matio'), ('METIS', 'metis'), ('Netcdf', 'netcdf-c'), ('STRUMPACK', 'strumpack'), ('SuperLU', 'superlu'), ('X11', 'libx11'), ('Zlib', 'zlib'), ] if spec.satisfies('@13:'): tpl_dep_map.append(('HWLOC', 'hwloc')) for tpl_name, dep_name in tpl_dep_map: have_dep = (dep_name in spec) options.append(define('TPL_ENABLE_' + tpl_name, have_dep)) if not have_dep: continue depspec = spec[dep_name] options.extend([ define(tpl_name + '_INCLUDE_DIRS', depspec.prefix.include), define(tpl_name + '_ROOT', depspec.prefix), define(tpl_name + '_LIBRARY_NAMES', depspec.libs.names), define(tpl_name + '_LIBRARY_DIRS', depspec.libs.directories), ]) if '+suite-sparse' in spec: options.extend([ # FIXME: Trilinos seems to be looking for static libs only, # patch CMake TPL file? define('TPL_ENABLE_Cholmod', False), # define('TPL_ENABLE_Cholmod', True), # define('Cholmod_LIBRARY_DIRS', ( # spec['suite-sparse'].prefix.lib) # define('Cholmod_INCLUDE_DIRS', ( # spec['suite-sparse'].prefix.include) define('TPL_ENABLE_UMFPACK', True), define('UMFPACK_LIBRARY_DIRS', spec['suite-sparse'].prefix.lib), define('UMFPACK_INCLUDE_DIRS', spec['suite-sparse'].prefix.include), define('UMFPACK_LIBRARY_NAMES', [ 'umfpack', 'amd', 'colamd', 'cholmod', 'suitesparseconfig' ]), ]) else: options.extend([ define('TPL_ENABLE_Cholmod', False), define('TPL_ENABLE_UMFPACK', False), ]) # METIS and ParMETIS mostly depend on transitive dependencies # STRUMPACK and SuperLU-dist, so don't provide a separate variant for # them. have_metis = 'metis' in spec options.append(define('TPL_ENABLE_METIS', have_metis)) if have_metis: options.extend([ define('METIS_LIBRARY_DIRS', spec['metis'].prefix.lib), define('METIS_LIBRARY_NAMES', 'metis'), define('TPL_METIS_INCLUDE_DIRS', spec['metis'].prefix.include), ]) have_parmetis = 'parmetis' in spec options.append(define('TPL_ENABLE_ParMETIS', have_parmetis)) if have_parmetis: options.extend([ define('ParMETIS_LIBRARY_DIRS', [ spec['parmetis'].prefix.lib, spec['metis'].prefix.lib ]), define('ParMETIS_LIBRARY_NAMES', ['parmetis', 'metis']), define('TPL_ParMETIS_INCLUDE_DIRS', [ spec['parmetis'].prefix.include, spec['metis'].prefix.include ]), ]) options.append(define_tpl_enable('MUMPS')) options.append(define_tpl_enable('SCALAPACK', 'mumps')) if '+mumps' in spec: scalapack = spec['scalapack'].libs options.extend([ define('MUMPS_LIBRARY_DIRS', spec['mumps'].prefix.lib), # order is important! define('MUMPS_LIBRARY_NAMES', [ 'dmumps', 'mumps_common', 'pord' ]), define('SCALAPACK_LIBRARY_NAMES', scalapack.names), define('SCALAPACK_LIBRARY_DIRS', scalapack.directories), ]) # see # https://github.com/trilinos/Trilinos/blob/master/packages/amesos/README-MUMPS cxx_flags.extend([ '-DMUMPS_5_0' ]) options.append(define_tpl_enable('SuperLUDist', 'superlu-dist')) if '+superlu-dist' in spec: options.extend([ define('KokkosTSQR_ENABLE_Complex', False), define('TPL_ENABLE_SuperLUDist', True), define('SuperLUDist_LIBRARY_DIRS', spec['superlu-dist'].prefix.lib), define('SuperLUDist_INCLUDE_DIRS', spec['superlu-dist'].prefix.include), ]) if spec.satisfies('^superlu-dist@4.0:'): options.extend([ define('HAVE_SUPERLUDIST_LUSTRUCTINIT_2ARG', True), ]) if '+strumpack' in spec: options.append(define('Amesos2_ENABLE_STRUMPACK', True)) options.append(define_tpl_enable('Pnetcdf')) if '+pnetcdf' in spec: options.extend([ define('TPL_Netcdf_Enables_Netcdf4', True), define('TPL_Netcdf_PARALLEL', True), define('PNetCDF_ROOT', spec['parallel-netcdf'].prefix), ]) if '@13: +kokkos' in spec: kkmarch = Kokkos.spack_micro_arch_map.get(spec.target.name, None) if kkmarch: options.append(define("Kokkos_ARCH_" + kkmarch.upper(), True)) # ################# Miscellaneous Stuff ###################### # CUDA options.append(define_tpl_enable('CUDA')) if '+cuda' in spec: options.extend([ define('Kokkos_ENABLE_CUDA', True), define('Kokkos_ENABLE_CUDA_UVM', True), define('Kokkos_ENABLE_CUDA_LAMBDA', True)]) if '+cuda_rdc' in spec: options.append(define( 'Kokkos_ENABLE_CUDA_RELOCATABLE_DEVICE_CODE', True)) for iArchCC in spec.variants['cuda_arch'].value: options.append(define( "Kokkos_ARCH_" + Kokkos.spack_cuda_arch_map[iArchCC].upper(), True)) if '+wrapper' in spec: cxx_flags.extend(['--expt-extended-lambda']) # OpenMP options.append(define_trilinos_enable('OpenMP')) if '+openmp' in spec: options.append(define('Kokkos_ENABLE_OpenMP', True)) if '+tpetra' in spec: options.append(define('Tpetra_INST_OPENMP', True)) # Fortran lib (assumes clang is built with gfortran!) if '+fortran' in spec and ( spec.satisfies('%gcc') or spec.satisfies('%clang') or spec.satisfies('%apple-clang') ): options.append(define('Trilinos_ENABLE_Fortran', True)) if '+mpi' in spec: libgfortran = os.path.dirname(os.popen( '%s --print-file-name libgfortran.a' % spec['mpi'].mpifc).read()) options.append(define( 'Trilinos_EXTRA_LINK_FLAGS', '-L%s/ -lgfortran' % (libgfortran), )) # Explicit Template Instantiation (ETI) in Tpetra # NOTE: Trilinos will soon move to fixed std::uint64_t for GO and # std::int32_t or std::int64_t for local. options.append(define_from_variant( 'Trilinos_ENABLE_EXPLICIT_INSTANTIATION', 'explicit_template_instantiation')) complex_s = spec.variants['complex'].value float_s = spec.variants['float'].value options.extend([ define('Teuchos_ENABLE_COMPLEX', complex_s), define('Teuchos_ENABLE_FLOAT', float_s), ]) if '+explicit_template_instantiation' in spec and '+tpetra' in spec: options.extend([ define('Tpetra_INST_DOUBLE', True), define('Tpetra_INST_COMPLEX_DOUBLE', complex_s), define('Tpetra_INST_COMPLEX_FLOAT', float_s and complex_s), define('Tpetra_INST_FLOAT', float_s), define('Tpetra_INST_SERIAL', True), ]) gotype = spec.variants['gotype'].value if gotype == 'all': # default in older Trilinos versions to enable multiple GOs options.extend([ define('Tpetra_INST_INT_INT', True), define('Tpetra_INST_INT_LONG', True), define('Tpetra_INST_INT_LONG_LONG', True), ]) else: options.extend([ define('Tpetra_INST_INT_INT', gotype == 'int'), define('Tpetra_INST_INT_LONG', gotype == 'long'), define('Tpetra_INST_INT_LONG_LONG', gotype == 'long_long'), ]) # disable due to compiler / config errors: if spec.satisfies('%xl') or spec.satisfies('%xl_r'): options.extend([ define('Trilinos_ENABLE_Pamgen', False), define('Trilinos_ENABLE_Stokhos', False), ]) if sys.platform == 'darwin': options.append(define('Trilinos_ENABLE_FEI', False)) if '+stk' in spec: cxx_flags.extend(['-DSTK_NO_BOOST_STACKTRACE']) if sys.platform == 'darwin' and macos_version() >= Version('10.12'): # use @rpath on Sierra due to limit of dynamic loader options.append(define('CMAKE_MACOSX_RPATH', True)) else: options.append(define('CMAKE_INSTALL_NAME_DIR', self.prefix.lib)) if spec.satisfies('%intel') and spec.satisfies('@12.6.2'): # Panzer uses some std:chrono that is not recognized by Intel # Don't know which (maybe all) Trilinos versions this applies to # Don't know which (maybe all) Intel versions this applies to options.append(define('Trilinos_ENABLE_Panzer', False)) # collect CXX flags: options.append(define('CMAKE_CXX_FLAGS', (' '.join(cxx_flags)))) # disable due to compiler / config errors: options.append(define('Trilinos_ENABLE_Pike', False)) return options @run_after('install') def filter_python(self): # When trilinos is built with Python, libpytrilinos is included # through cmake configure files. Namely, Trilinos_LIBRARIES in # TrilinosConfig.cmake contains pytrilinos. This leads to a # run-time error: Symbol not found: _PyBool_Type and prevents # Trilinos to be used in any C++ code, which links executable # against the libraries listed in Trilinos_LIBRARIES. See # https://github.com/Homebrew/homebrew-science/issues/2148#issuecomment-103614509 # A workaround is to remove PyTrilinos from the COMPONENTS_LIST : if '+python' in self.spec: filter_file(r'(SET\(COMPONENTS_LIST.*)(PyTrilinos;)(.*)', (r'\1\3'), '%s/cmake/Trilinos/TrilinosConfig.cmake' % self.prefix.lib) def setup_run_environment(self, env): if '+exodus' in self.spec: env.prepend_path('PYTHONPATH', self.prefix.lib) if '+cuda' in self.spec: # currently Trilinos doesn't perform the memory fence so # it relies on blocking CUDA kernel launch. env.set('CUDA_LAUNCH_BLOCKING', '1')