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| author | George Hartzell <hartzell@alerce.com> | 2018-12-04 04:44:15 -0800 |
|---|---|---|
| committer | Massimiliano Culpo <massimiliano.culpo@gmail.com> | 2018-12-04 13:44:15 +0100 |
| commit | 0c3f220fb15ec847ab52349de3e2083f97c99c00 (patch) | |
| tree | c0bc9f1e7d6f2815c68c24d1ad20a29a083d64be | |
| parent | e3d204cb8f2ea9017ea8fa60dc52bf1d65b05e52 (diff) | |
| download | spack-0c3f220fb15ec847ab52349de3e2083f97c99c00.tar.gz spack-0c3f220fb15ec847ab52349de3e2083f97c99c00.tar.bz2 spack-0c3f220fb15ec847ab52349de3e2083f97c99c00.tar.xz spack-0c3f220fb15ec847ab52349de3e2083f97c99c00.zip | |
Disallow bcl2fastq2 on OS X (#9966)
* Disallow bcl2fastq2 on OS X
[Illumina's computing requirements][reqs] claim support for RHEL/CentOS and
go on to say:
> May be possible to install and run on other 64-bit Linux distributions or Unix variants.
The sufficient issue is its reliance of malloc.h. There may be more.
[reqs]: https://support.illumina.com/sequencing/sequencing_software/bcl2fastq-conversion-software/computing-requirements.html
* Add an informative msg for the user
| -rw-r--r-- | var/spack/repos/builtin/packages/bcl2fastq2/package.py | 3 |
1 files changed, 3 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/bcl2fastq2/package.py b/var/spack/repos/builtin/packages/bcl2fastq2/package.py index 1b07e50d54..54f5cfc017 100644 --- a/var/spack/repos/builtin/packages/bcl2fastq2/package.py +++ b/var/spack/repos/builtin/packages/bcl2fastq2/package.py @@ -28,6 +28,9 @@ class Bcl2fastq2(Package): # mirror/bcl2fastq2/bcl2fastq2-2.17.1.14.zip and go from there. version('2.17.1.14', '7426226c6db095862e636b95c38608d3') + conflicts('platform=darwin', + msg='malloc.h/etc requirements break build on macs') + depends_on('boost@1.54.0') depends_on('cmake@2.8.9:') depends_on('libxml2@2.7.8') |