summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorsnehring <7978778+snehring@users.noreply.github.com>2023-03-29 14:28:17 -0500
committerGitHub <noreply@github.com>2023-03-29 12:28:17 -0700
commitb6390e335cfe00e66f3d8e3bcf8e0eaa733352c0 (patch)
treef0d6677ac61f331826f739ff492aac2b0385649e
parent3e09f04241310e96f6eded89db6385e424e8db7d (diff)
downloadspack-b6390e335cfe00e66f3d8e3bcf8e0eaa733352c0.tar.gz
spack-b6390e335cfe00e66f3d8e3bcf8e0eaa733352c0.tar.bz2
spack-b6390e335cfe00e66f3d8e3bcf8e0eaa733352c0.tar.xz
spack-b6390e335cfe00e66f3d8e3bcf8e0eaa733352c0.zip
gmap-gsnap: Adding new version and perl run dep (#36508)
-rw-r--r--var/spack/repos/builtin/packages/gmap-gsnap/package.py9
1 files changed, 9 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/gmap-gsnap/package.py b/var/spack/repos/builtin/packages/gmap-gsnap/package.py
index 5c9461de5f..f11ed24257 100644
--- a/var/spack/repos/builtin/packages/gmap-gsnap/package.py
+++ b/var/spack/repos/builtin/packages/gmap-gsnap/package.py
@@ -14,6 +14,11 @@ class GmapGsnap(AutotoolsPackage):
homepage = "http://research-pub.gene.com/gmap/"
url = "http://research-pub.gene.com/gmap/src/gmap-gsnap-2017-06-16.tar.gz"
+ maintainers("snehring")
+
+ version(
+ "2023-02-17", sha256="d54abb6bc59da46823f5a1a9d94872a6b90468699112a6f375ddc7b91340db06"
+ )
version(
"2021-03-08", sha256="00de0e945b86bcbda50df94c68a61957f3783e232cce466fcd5f8d3a55398aa2"
)
@@ -44,6 +49,7 @@ class GmapGsnap(AutotoolsPackage):
depends_on("zlib")
depends_on("bzip2")
+ depends_on("perl", type="run")
variant(
"simd",
@@ -74,3 +80,6 @@ class GmapGsnap(AutotoolsPackage):
for simd in spec.variants["simd"].value:
with working_dir(simd):
make("install")
+
+ def setup_build_environment(self, env):
+ env.set("PERL", self.spec["perl"].prefix.bin.perl)