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# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class PyAntspyx(PythonPackage):
"""Advanced Normalization Tools in Python."""
homepage = "https://pypi.org/project/antspyx/"
pypi = "antspyx/antspyx-0.3.7.tar.gz"
license("Apache-2.0")
version("0.3.7", sha256="cd831eb966d4ce82cc0afb65edddd8e2db6b439d418316e6356199f966104c1b")
depends_on("python@3.6:", type=("build", "run"))
depends_on("py-setuptools", type="build")
depends_on("cmake@3.10:", type="build")
depends_on("itk+review+antspy")
depends_on("pil", type=("build", "run"))
depends_on("py-pandas", type=("build", "run"))
depends_on("py-numpy", type=("build", "run"))
depends_on("py-scipy", type=("build", "run"))
depends_on("py-scikit-image", type=("build", "run"))
depends_on("py-scikit-learn", type=("build", "run"))
depends_on("py-statsmodels", type=("build", "run"))
depends_on("py-webcolors", type=("build", "run"))
depends_on("py-matplotlib", type=("build", "run"))
depends_on("py-pyyaml", type=("build", "run"))
depends_on("py-chart-studio", type=("build", "run"))
depends_on("py-nibabel", type=("build", "run"))
# from ITK, somehow does not get passed through. Required for building, together with
# the following patch
depends_on("googletest")
patch("fix-itk-gtest.diff")
patch("submodule-imposter.diff")
resource(
name="submodule-imposter-pybind11",
git="https://github.com/stnava/pybind11/",
destination="ants/lib",
)
resource(
name="submodule-imposter-antscore",
git="https://github.com/ANTsX/ANTs.git",
commit="871cad073908952b095e4b520335fc441e059264",
destination="ants/lib",
when="@0.3.7", # ANTs dependency needs updating for every version
)
def setup_build_environment(self, env):
env.set("ITK_DIR", self.spec["itk"].prefix)
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