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authorA. Wilcox <AWilcox@Wilcox-Tech.com>2017-06-11 08:41:26 +0000
committerA. Wilcox <AWilcox@Wilcox-Tech.com>2017-06-11 08:41:26 +0000
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The New Plan
ebuild branch has old ebuilds. profiles dir still has CFLAGS. Everything else is removed or modified for changing of upstream to Alpine.
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-TINKER – Software Tools for Molecular Design
-
-Version 4.2 June 2004
-Copyright © 1990-2004 Jay William Ponder
-
-TINKER is a modular program package for molecular mechanics-based potential
-energy calculations, geometry optimization, molecular dynamics simulation,
-distance geometry and structural analysis.
-
-Selected References for the TINKER Package:
-
-P. Ren and J. W. Ponder, J. Phys. Chem. B, 107, 5933-5947 (2003)
-P. Ren and J. W. Ponder, J. Comput. Chem., 23, 1497-1506 (2002)
-R. V. Pappu, R. K. Hart and J. W. Ponder, J. Phys. Chem. B, 102, 9725-9742
-(1998)
-M. E. Hodsdon, J. W. Ponder and D. P. Cistola, J. Mol. Biol., 264, 585-602
-(1996)
-C. E. Kundrot, J. W. Ponder and F. M. Richards, J. Comput. Chem., 12, 402-409
-(1991)
-J. W. Ponder and F. M. Richards, J. Comput. Chem., 8, 1016-1024 (1987)
-
-Conditions for Use of the TINKER Package:
-
-The TINKER software is registered under U.S. Copyright Law. The source code was
-developed by the author and is distributed solely through the Department of
-Biochemistry and Molecular Biophysics at Washington University. Its use is
-subject to the following conditions:
-
-(1) Use of this software is restricted to the individual, laboratory or
-organization to which it is supplied. The package and portions thereof may not
-be sold nor may copies be distributed to third parties without the express
-permission of the author and Washington University.
-(2) This software package is provided on an "as is" basis. The author in no
-way warrants either this software or results it may produce.
-(3) The author is under no obligation to provide any services by way of
-maintenance, updates or corrections for this software.
-(4) Reports or publications resulting from use of this software package must
-contain an acknowledgment in the form commonly used in academic research.